Fold library entry viewer: c3lppA_

Added to library: Sun Aug 29 00:49:59 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	K	C	P	N	V	L	N	D	P	V	N	V	R	I	N	C	I	P	E	Q	F	P	T	E	G	I	C	A	Q	R	G	C	C	W	R	P	W	N	D	S	L	I	P	W	C	F	F	V	D	N	H	G	Y	N	V	Q	D	M	T	T	T	S	I	G	V	E	A	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S	S	S			G	G	G			B	S			S	S											T							S	S	S	S	S		S				T	T	S	S											S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	R	I	P	S	P	T	L	F	G	N	D	I	N	S	V	L	F	T	T	Q	N	Q	T	P	N	R	F	R	F	K	I	T	D	P	N	N	R	R	Y	E	V	P	H	Q	Y	V	K	E	F	T	G	P	T	V	S	D	T	L	Y	D	V	K	V	A	Q	N	P	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S		B		S											T	T									T	T	S								S	S	S									S	S		S								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	Q	V	I	R	K	S	N	G	K	T	L	F	D	T	S	I	G	P	L	V	Y	S	D	Q	Y	L	Q	I	S	A	R	L	P	S	D	Y	I	Y	G	I	G	E	Q	V	H	K	R	F	R	H	D	L	S	W	K	T	W	P	I	F	T	R	D	Q	L	P	G	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T						G	G	G	S						T	T									S	S	S							S	S			S	S	S	S				S	S						S								S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	N	N	L	Y	G	H	Q	T	F	F	M	C	I	E	D	T	S	G	K	S	F	G	V	F	L	M	N	S	N	A	M	E	I	F	I	Q	P	T	P	I	V	T	Y	R	V	T	G	G	I	L	D	F	Y	I	L	L	G	D	T	P	E	Q	V	V	Q	Q	Y	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S											S	T	T												S								T	T	T							S	S	S										S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	V	G	L	P	A	M	P	A	Y	W	N	L	G	F	Q	L	S	R	W	N	Y	K	S	L	D	V	V	K	E	V	V	R	R	N	R	E	A	G	I	P	F	D	T	Q	V	T	D	I	D	Y	M	E	D	K	K	D	F	T	Y	D	Q	V	A	F	N	G	L	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	G	S						S				S														T	T										G	G	G	S	S	T	T		T	T				T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	V	Q	D	L	H	D	H	G	Q	K	Y	V	I	I	L	D	P	A	I	S	I	G	R	R	A	N	G	T	T	Y	A	T	Y	E	R	G	N	T	Q	H	V	W	I	N	E	S	D	G	S	T	P	I	I	G	E	V	W	P	G	L	T	V	Y	P	D	F	T	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									S					S			T	T	S													T		B		B		T	T	S	S	S	B						T	T						B		T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	C	I	D	W	W	A	N	E	C	S	I	F	H	Q	E	V	Q	Y	D	G	L	W	I	D	M	N	E	V	S	S	F	I	Q	G	S	T	K	G	C	N	V	N	K	L	N	Y	P	P	F	T	P	D	I	L	D	K	L	M	Y	S	K	T	I	C	M	D	A	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S			S						S	T	T	T			S	S	S	B		T	T					S	T	T	T	S		S	S			S		G	G	G		T	T	T	T	S	B		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	W	G	K	Q	Y	D	V	H	S	L	Y	G	Y	S	M	A	I	A	T	E	Q	A	V	Q	K	V	F	P	N	K	R	S	F	I	L	T	R	S	T	F	A	G	S	G	R	H	A	A	H	W	L	G	D	N	T	A	S	W	E	Q	M	E	W	S	I	T	G	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							G	G	G																	S	T	T	B							S				T	T	G	G	G	T							S		B	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	F	S	L	F	G	I	P	L	V	G	A	D	I	C	G	F	V	A	E	T	T	E	E	L	C	R	R	W	M	Q	L	G	A	F	Y	P	F	S	R	N	H	N	S	D	G	Y	E	H	Q	D	P	A	F	F	G	Q	N	S	L	L	V	K	S	S	R	Q	Y	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			S						T		S	B	S															T	T	S	S	S							T	T	S				S	G	G	G	G		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	R	Y	T	L	L	P	F	L	Y	T	L	F	Y	K	A	H	V	F	G	E	T	V	A	R	P	V	L	H	E	F	Y	E	D	T	N	S	W	I	E	D	T	E	F	L	W	G	P	A	L	L	I	T	P	V	L	K	Q	G	A	D	T	V	S	A	Y	I	P	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																		S				T					T	T	S	G	G	G	G	G			S	S				T	T	T								S	T	T		S								S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	W	Y	D	Y	E	S	G	A	K	R	P	W	R	K	Q	R	V	D	M	Y	L	P	A	D	K	I	G	L	H	L	R	G	G	Y	I	I	P	I	Q	E	P	D	V	T	T	T	A	S	R	K	N	P	L	G	L	I	V	A	L	G	E	N	N	T	A	K	G	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T			B		S			S									T	T								T	T										S	S					T	T	S										T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	W	D	D	G	E	T	K	D	T	I	Q	N	G	N	Y	I	L	Y	T	F	S	V	S	N	N	T	L	D	I	V	C	T	H	S	S	Y	Q	E	G	T	T	L	A	F	Q	T	V	K	I	L	G	L	T	D	S	V	T	E	V	R	V	A	E	N	N	Q	P	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	B	T	T					T		S									T	T												G	G	G	G	G										S			S			S							T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.
Sequence	A	H	S	N	F	T	Y	D	A	S	N	Q	V	L	L	I	A	D	L	K	L	N	L	G	R	N	F	S	V	Q	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T						S					T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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