Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3lmdA_

Fold library idPDB HeaderMoleculeTitle
c3lmdA_PDB header: transferaseChain: A: PDB Molecule: geranylgeranyl pyrophosphate synthase;PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthase2 from corynebacterium glutamicum atcc 13032


Added to library: Sun Aug 29 06:09:19 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVSTTGASQVEFGDPELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFG
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)
TS

S
T
S




S

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EKPLSENVIKAAVVVEITHLATLYHDDVMDNARWDNSVAILAGDILLAHASGLMSQLGTDTVAHFAETFG
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) SSTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence ELVTGQMRETVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVD
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)

TTS
TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence DIIDIFSPGTDLREGVFTLPVLYALREDTPVGAELRDILTGPLEDDETVNHVLELLSQSGGRQAALDEVY
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)


T




S
SS


SSS
 .........290.........300.........310.......
Sequence RYMDIANAELDRLPDSTVKEALRNLATFTVKRVGEGH
Predicted secondary structure







SS confidence




































Known secondary structure (DSSP) TTS

STTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D