PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3llxA_

Fold library id	PDB Header	Molecule	Title
c3llxA_	PDB header: structure genomics, unknown function	Chain: A: PDB Molecule: predicted amino acid aldolase or racemase;	PDBTitle: crystal structure of protein of unknown function2 (yp_156143.1) from idiomarina loihiensis l2tr at 1.50 a3 resolution

Links to external resources
Added to library: Sat Aug 28 22:41:33 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S A P D W I A H P D T P Y L L I D E A K L K S N I N Y L K Q R V E S L G S H L R P H L T L R T L E A A G Y L L D S K S A P A T V S T L A E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G S S
S S T T
B
B
B
S S T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E A Y A K A G Y T D L L Y A V G I A P A K L K R V A A L R Q Q G I N L H I L L D N I T Q A Q A V V D Y A A E F G Q D F S V F I E I D S D D H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T T
S T
B
S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R G G I K P S D S K L L T I A K T L G E H F T G L X T H A G G S Y A C N T E Q G L K N F A K Q E C D A V R I A R N N L E T A G I H C A I T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B
T T
T G G G
G G G G G
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V G S T P T A H F G E D F S D I S E V R A G V Y T T F D L V X K N I G V C D F S H I A X S V V T T V I G H N K E K N W L L T D S G W X A L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S
G G G T
T S
G G G
T T T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence R D S G T A G Q N R D F G Y G Q V C K I D G S V L D G L C V N S T S Q E H G V I E L S D A Y Q L E D F P V G H Q L R I X P N H A C A T A A X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G G S S S
B T
T T S
B
S S
T T
G G G S
T T
S
T T

. . . . . . . . . 360 . . . . . . . . . 370 . .

Sequence H P V Y H V L X S D G S H N T W Q R I T G W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	P	D	W	I	A	H	P	D	T	P	Y	L	L	I	D	E	A	K	L	K	S	N	I	N	Y	L	K	Q	R	V	E	S	L	G	S	H	L	R	P	H	L	T	L	R	T	L	E	A	A	G	Y	L	L	D	S	K	S	A	P	A	T	V	S	T	L	A	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G	S	S		S	S																							T	T			B			B					B									S	S	T	T	S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	A	Y	A	K	A	G	Y	T	D	L	L	Y	A	V	G	I	A	P	A	K	L	K	R	V	A	A	L	R	Q	Q	G	I	N	L	H	I	L	L	D	N	I	T	Q	A	Q	A	V	V	D	Y	A	A	E	F	G	Q	D	F	S	V	F	I	E	I	D	S	D	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T												G	G	G										T	T									S															T									B		S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	G	G	I	K	P	S	D	S	K	L	L	T	I	A	K	T	L	G	E	H	F	T	G	L	X	T	H	A	G	G	S	Y	A	C	N	T	E	Q	G	L	K	N	F	A	K	Q	E	C	D	A	V	R	I	A	R	N	N	L	E	T	A	G	I	H	C	A	I	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		B		T	T		T										G	G	G									G	G	G	G	G			S																									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	G	S	T	P	T	A	H	F	G	E	D	F	S	D	I	S	E	V	R	A	G	V	Y	T	T	F	D	L	V	X	K	N	I	G	V	C	D	F	S	H	I	A	X	S	V	V	T	T	V	I	G	H	N	K	E	K	N	W	L	L	T	D	S	G	W	X	A	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			T	T		S						G	G	G	T									T	S			G	G	G														T	T	T	T					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	D	S	G	T	A	G	Q	N	R	D	F	G	Y	G	Q	V	C	K	I	D	G	S	V	L	D	G	L	C	V	N	S	T	S	Q	E	H	G	V	I	E	L	S	D	A	Y	Q	L	E	D	F	P	V	G	H	Q	L	R	I	X	P	N	H	A	C	A	T	A	A	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			G	G	G	G	S	S	S			B	T						T	T	S								B					S	S								T	T			G	G	G	S		T	T								S							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Sequence	H	P	V	Y	H	V	L	X	S	D	G	S	H	N	T	W	Q	R	I	T	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							T	T	S							B