PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ljlB_

Fold library id	PDB Header	Molecule	Title
c3ljlB_	PDB header: transcription regulator	Chain: B: PDB Molecule: transcriptional regulator luxt;	PDBTitle: the crystal structure of the full-length transcriptional2 regulator luxt from vibrio parahaemolyticus rimd 2210633.

Links to external resources
Added to library: Sat Aug 28 18:02:21 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S K E D T E I T I Q K I X D A V V D Q L L R L G Y D K X S Y T T L S Q Q T G V S R T G I S H H F P K K T D F T A A L D G R I F K X F I E H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
S S T
T G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E F E K G L D A F S Q S W I K A L E D S E F L A I L R L L F H H I V T S E S A H E F A A N G I D R L Y K X V E S Q F G S G G D K E L E W L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
S S
G G G

. . . . . . . . .

Sequence G R S L I Q X S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	E	D	T	E	I	T	I	Q	K	I	X	D	A	V	V	D	Q	L	L	R	L	G	Y	D	K	X	S	Y	T	T	L	S	Q	Q	T	G	V	S	R	T	G	I	S	H	H	F	P	K	K	T	D	F	T	A	A	L	D	G	R	I	F	K	X	F	I	E	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T														S	S											S	S	T									T							G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	F	E	K	G	L	D	A	F	S	Q	S	W	I	K	A	L	E	D	S	E	F	L	A	I	L	R	L	L	F	H	H	I	V	T	S	E	S	A	H	E	F	A	A	N	G	I	D	R	L	Y	K	X	V	E	S	Q	F	G	S	G	G	D	K	E	L	E	W	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S													T	T																			S	S																					G	G	G
	.	.	.	.	.	.	.	.	.
Sequence	G	R	S	L	I	Q	X	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T