PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ledA_

Fold library id	PDB Header	Molecule	Title
c3ledA_	PDB header: transferase	Chain: A: PDB Molecule: 3-oxoacyl-acyl carrier protein synthase iii;	PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase iii from rhodopseudomonas palustris cga009

Links to external resources
Added to library: Sun Aug 29 09:43:06 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y F Q G V R P A V I A A T G L Y T P P D S V S N A E L V E A F N T Y V A N F N A A N K A R I E A G E I E P L Q P S S S E F I E K A S G I K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R Y V V A K P G I V D P D V X R P I I P E R S N D E L S I L A E X A V T A A E Q A I E R W G K P R E R I G A V L C A C S N X Q R A Y P A X A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G G
T T T
S
T T S
S
G G G S S
S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I E V Q N A L G L G G F A F D X N V A C S S A T F G L K T A A D F V G G G S V D A V L X V N P E I C S G H L N F R D R D S H F I F G D V A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
G G G T T S
S G G G G
T T
T T T T T T B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A A I V E R A D D A Q G G W S I L G T K L K T Q F S N N I R N N A G F L N R A W P E G R D K A D K L F V Q Q G R K V F K E V V P L V S E X I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S S
S S
S G G G G G S G G G T T S G G G S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence I E H A R E I G I D P H G L K R X W L H Q A N I N X N E I I G R K V L G R D P T R D E N V I I L D D Y A N T S S A G S I I A F H K H Q D D X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
S
S S
T S
T T T B
B
G G G
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . .

Sequence A Q G D L G L I C S F G A G Y S A G T V F V Q K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	F	Q	G	V	R	P	A	V	I	A	A	T	G	L	Y	T	P	P	D	S	V	S	N	A	E	L	V	E	A	F	N	T	Y	V	A	N	F	N	A	A	N	K	A	R	I	E	A	G	E	I	E	P	L	Q	P	S	S	S	E	F	I	E	K	A	S	G	I	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S																							T						T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	Y	V	V	A	K	P	G	I	V	D	P	D	V	X	R	P	I	I	P	E	R	S	N	D	E	L	S	I	L	A	E	X	A	V	T	A	A	E	Q	A	I	E	R	W	G	K	P	R	E	R	I	G	A	V	L	C	A	C	S	N	X	Q	R	A	Y	P	A	X	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			G	G	G	G		T	T	T		S								T	T	S																					S		G	G	G								S	S			S		S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	E	V	Q	N	A	L	G	L	G	G	F	A	F	D	X	N	V	A	C	S	S	A	T	F	G	L	K	T	A	A	D	F	V	G	G	G	S	V	D	A	V	L	X	V	N	P	E	I	C	S	G	H	L	N	F	R	D	R	D	S	H	F	I	F	G	D	V	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			S								G	G	G															T	T	S		S										G	G	G	G			T	T		T	T	T	T	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	A	I	V	E	R	A	D	D	A	Q	G	G	W	S	I	L	G	T	K	L	K	T	Q	F	S	N	N	I	R	N	N	A	G	F	L	N	R	A	W	P	E	G	R	D	K	A	D	K	L	F	V	Q	Q	G	R	K	V	F	K	E	V	V	P	L	V	S	E	X	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G			S	S														S	S						S	G	G	G	G	G	S	G	G	G	T	T	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	E	H	A	R	E	I	G	I	D	P	H	G	L	K	R	X	W	L	H	Q	A	N	I	N	X	N	E	I	I	G	R	K	V	L	G	R	D	P	T	R	D	E	N	V	I	I	L	D	D	Y	A	N	T	S	S	A	G	S	I	I	A	F	H	K	H	Q	D	D	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			G	G	G		S						S	S														T	S				T	T	T	B									B		G	G	G											T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Sequence	A	Q	G	D	L	G	L	I	C	S	F	G	A	G	Y	S	A	G	T	V	F	V	Q	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										T	T	T