PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3l6uA_

Fold library id	PDB Header	Molecule	Title
c3l6uA_	PDB header: transport protein	Chain: A: PDB Molecule: abc-type sugar transport system periplasmic	PDBTitle: crystal structure of abc-type sugar transport system,2 periplasmic component from exiguobacterium sibiricum

Links to external resources
Added to library: Sat Aug 28 17:30:08 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N I V G F T I V N D K H E F A Q R L I N A F K A E A K A N K Y E A L V A T S Q N S R I S E R E Q I L E F V H L K V D A I F I T T L D D V Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S T T
S S
T T
S
S
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G S A I E E A K K A G I P V F A I D R X I R S D A V V S S I T S N N Q X I G E Q L A S Y I K N E L I K Q T G R S T G R I V E I T G T A N V Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T
S
S
S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T T N E R H R G F L K G I E N E P T L S I V D S V S G N Y D P V T S E R V X R Q V I D S G I P F D A V Y C H N D D I A X G V L E A L K K A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T
T T
S S S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . .

Sequence I S G K I V V G I D G N R A I L E A V D X K S X D A T V V Q S A E E X X K V A F S A L K L H T K N K K I P D R F Y T Y S Y L Y D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	I	V	G	F	T	I	V	N	D	K	H	E	F	A	Q	R	L	I	N	A	F	K	A	E	A	K	A	N	K	Y	E	A	L	V	A	T	S	Q	N	S	R	I	S	E	R	E	Q	I	L	E	F	V	H	L	K	V	D	A	I	F	I	T	T	L	D	D	V	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S		S																	T	T									S	S															T	T		S							S		T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	S	A	I	E	E	A	K	K	A	G	I	P	V	F	A	I	D	R	X	I	R	S	D	A	V	V	S	S	I	T	S	N	N	Q	X	I	G	E	Q	L	A	S	Y	I	K	N	E	L	I	K	Q	T	G	R	S	T	G	R	I	V	E	I	T	G	T	A	N	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T							S	S					T	T		S																											S		S										S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	T	N	E	R	H	R	G	F	L	K	G	I	E	N	E	P	T	L	S	I	V	D	S	V	S	G	N	Y	D	P	V	T	S	E	R	V	X	R	Q	V	I	D	S	G	I	P	F	D	A	V	Y	C	H	N	D	D	I	A	X	G	V	L	E	A	L	K	K	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T		T	T										T	T															T	T				S					S	S														T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Sequence	I	S	G	K	I	V	V	G	I	D	G	N	R	A	I	L	E	A	V	D	X	K	S	X	D	A	T	V	V	Q	S	A	E	E	X	X	K	V	A	F	S	A	L	K	L	H	T	K	N	K	K	I	P	D	R	F	Y	T	Y	S	Y	L	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	S	S																								T	T					S