PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3l6aA_

Fold library id	PDB Header	Molecule	Title
c3l6aA_	PDB header: translation	Chain: A: PDB Molecule: eukaryotic translation initiation factor 4 gamma 2;	PDBTitle: crystal structure of the c-terminal region of human p97

Links to external resources
Added to library: Sat Aug 28 23:54:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H H S K E E L L K L T E T V V T E Y L N S G N A N E A V N G V R E M R A P K H F L P E M L S K V I I L S L D R S D E D K E K A S S L I S L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
G G G T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K Q E G I A T S D N F M Q A F L N V L D Q C P K L E V D I P L V K S Y L A Q F A A R A I I S E L V S I S E L A Q P L E S G T H F P L F L L C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
T
T T T T S S
G G G T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L Q Q L A K L Q D R E W L T E L F Q Q S K V N M Q K M L P E I D Q N K D R M L E I L E G K G L S F L F P L L K L E K E L L K Q I K L D P S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
S G G G S
G G G
S T
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Q T I Y K W I K D N I S P K L H V D K G F V N I L M T S F L Q Y I S S E V N A P S K E Q L E Q E K Q L L L S F K P V M Q K F L H D H V D L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence V S A L Y A L Q V H C Y N S N F P K G M L L R F F V H F Y D M E I I E E E A F L A W K E D I T Q E F P G K G K A L F Q V N Q W L T W L E T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T S S
S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	S	K	E	E	L	L	K	L	T	E	T	V	V	T	E	Y	L	N	S	G	N	A	N	E	A	V	N	G	V	R	E	M	R	A	P	K	H	F	L	P	E	M	L	S	K	V	I	I	L	S	L	D	R	S	D	E	D	K	E	K	A	S	S	L	I	S	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T			G	G	G														T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	Q	E	G	I	A	T	S	D	N	F	M	Q	A	F	L	N	V	L	D	Q	C	P	K	L	E	V	D	I	P	L	V	K	S	Y	L	A	Q	F	A	A	R	A	I	I	S	E	L	V	S	I	S	E	L	A	Q	P	L	E	S	G	T	H	F	P	L	F	L	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S															T									T	T															T	T	S	S										G	G	G	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	Q	Q	L	A	K	L	Q	D	R	E	W	L	T	E	L	F	Q	Q	S	K	V	N	M	Q	K	M	L	P	E	I	D	Q	N	K	D	R	M	L	E	I	L	E	G	K	G	L	S	F	L	F	P	L	L	K	L	E	K	E	L	L	K	Q	I	K	L	D	P	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S													T			S	G	G	G	S		G	G	G		S												T		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	T	I	Y	K	W	I	K	D	N	I	S	P	K	L	H	V	D	K	G	F	V	N	I	L	M	T	S	F	L	Q	Y	I	S	S	E	V	N	A	P	S	K	E	Q	L	E	Q	E	K	Q	L	L	L	S	F	K	P	V	M	Q	K	F	L	H	D	H	V	D	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S						T																																															T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	S	A	L	Y	A	L	Q	V	H	C	Y	N	S	N	F	P	K	G	M	L	L	R	F	F	V	H	F	Y	D	M	E	I	I	E	E	E	A	F	L	A	W	K	E	D	I	T	Q	E	F	P	G	K	G	K	A	L	F	Q	V	N	Q	W	L	T	W	L	E	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T			T	T												T	T	S	S															S	S	T	T