PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3l60A_

Fold library id	PDB Header	Molecule	Title
c3l60A_	PDB header: oxidoreductase	Chain: A: PDB Molecule: branched-chain alpha-keto acid dehydrogenase;	PDBTitle: crystal structure of branched-chain alpha-keto acid2 dehydrogenase subunit e2 from mycobacterium tuberculosis

Links to external resources
Added to library: Sat Aug 28 21:39:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P D V R P V H G V H A R M A E K M T L S H K E I P T A K A S V E V I C A E L L R L R D R F V S A A P E I T P F A L T L R L L V I A L K H N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T
G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I L N S T W V D S G E G P Q V H V H R G V H L G F G A A T E R G L L V P V V T D A Q D K N T R E L A S R V A E L I T G A R E G T L T P A E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S
T T T S
S S
T T
T T G G G
T
G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R G S T F T V S N F G A L G V D D G V P V I N H P E A A I L G L G A I K P R P V V V G G E V V A R P T M T L T C V F D H R V V D G A Q V A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
G G G G T
S S
T T
S
T T T T T

. . . . . . . . . 220 . . . . . . . . .

Sequence F M C E L R D L I E S P E T A L L D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	D	V	R	P	V	H	G	V	H	A	R	M	A	E	K	M	T	L	S	H	K	E	I	P	T	A	K	A	S	V	E	V	I	C	A	E	L	L	R	L	R	D	R	F	V	S	A	A	P	E	I	T	P	F	A	L	T	L	R	L	L	V	I	A	L	K	H	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																														T	T	T		T	T																			G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	L	N	S	T	W	V	D	S	G	E	G	P	Q	V	H	V	H	R	G	V	H	L	G	F	G	A	A	T	E	R	G	L	L	V	P	V	V	T	D	A	Q	D	K	N	T	R	E	L	A	S	R	V	A	E	L	I	T	G	A	R	E	G	T	L	T	P	A	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S						T	T	T	S							S	S										T	T								T	T	G	G	G																				T				G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	G	S	T	F	T	V	S	N	F	G	A	L	G	V	D	D	G	V	P	V	I	N	H	P	E	A	A	I	L	G	L	G	A	I	K	P	R	P	V	V	V	G	G	E	V	V	A	R	P	T	M	T	L	T	C	V	F	D	H	R	V	V	D	G	A	Q	V	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S						G	G	G	G	T		S	S							T	T		S																T	T																T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	F	M	C	E	L	R	D	L	I	E	S	P	E	T	A	L	L	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S					T	T	T