PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3l1nA_

Fold library id	PDB Header	Molecule	Title
c3l1nA_	PDB header: lipid binding protein	Chain: A: PDB Molecule: cell wall antigen;	PDBTitle: crystal structure of mp1p ligand binding domain 2 complexd with2 palmitic acid

Links to external resources
Added to library: Sun Aug 29 01:12:47 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E A T K V Q R D I S A F K K V X Q N I S L A V N K F N V D I E R Y V G G D A S H L L A D G N V L I K A T L D G V Q S L Q N E P P L S S X E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L A L V G P V Q D L S N Q I X L A I Q N L I D K K E P L V Q A G F G G K V E N N L R Q Q E E A A Q K L S E L V S T K V P H E L A D I S R Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
G G G

. . . . . . . . . 150 . . . . .

Sequence S D G I A A G I K K G I D A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	A	T	K	V	Q	R	D	I	S	A	F	K	K	V	X	Q	N	I	S	L	A	V	N	K	F	N	V	D	I	E	R	Y	V	G	G	D	A	S	H	L	L	A	D	G	N	V	L	I	K	A	T	L	D	G	V	Q	S	L	Q	N	E	P	P	L	S	S	X	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																														S	S																							T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	A	L	V	G	P	V	Q	D	L	S	N	Q	I	X	L	A	I	Q	N	L	I	D	K	K	E	P	L	V	Q	A	G	F	G	G	K	V	E	N	N	L	R	Q	Q	E	E	A	A	Q	K	L	S	E	L	V	S	T	K	V	P	H	E	L	A	D	I	S	R	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T							T	T																											S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Sequence	S	D	G	I	A	A	G	I	K	K	G	I	D	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)