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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3l0oA_

Fold library idPDB HeaderMoleculeTitle
c3l0oA_PDB header: hydrolaseChain: A: PDB Molecule: transcription termination factor rho;PDBTitle: structure of rna-free rho transcription termination factor from2 thermotoga maritima


Added to library: Wed Jan 9 22:32:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQKTISISELESMNIKQLYEIAKSLGIPRYTSMRKRDLIFAILKAQTESTGYFFGEGVLEIHPEGFGFLR
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Known secondary structure (DSSP)
TTSSTS
TT
TTGGGS
GGGSSSS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RIEDNLLPSNDDIYISPSQIRKFNLNTGDIISGVIRKPKEGEKYFAMIKIEAINYRPVDRVNFDNLTPDY
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Known secondary structure (DSSP)
GGGTT


SS

TT

TT



SSS
STT




GGGS

 .........150.........160.........170.........180.........190.........200.........210
Sequence PRERFILETDPKIYSTRLIDLFAPIGKGQRGMIVAPPKAGKTTILKEIANGIAENHPDTIRIILLIDERP
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Known secondary structure (DSSP)

SB




STT
S

BTT

TT


TTS
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence EEVTDIRESTNAIVIAAPFDMPPDKQVKVAELTLEMAKRLVEFNYDVVILLDSLTRLARVYNIVVPPSGK
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Known secondary structure (DSSP) SSSSSS

S

TTS
TT

S


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLTGGVDPAALYKPKRFFGAARNTREGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELVLSRQLANKR
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Known secondary structure (DSSP)

SSS

SS
ST
SSS

SSS
STTT

SB
TTT
 .........360.........370.........380.........390.........400.........410...
Sequence IFPAINLLLSGTRREELLLDEETLKKVWLLRRMLSAMTEEEGLTLILNKLSETSSNEEFLKLI
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Known secondary structure (DSSP)
SS
B
STT
TTGGGTS
TTS
T
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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