PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3l09B_

Fold library id	PDB Header	Molecule	Title
c3l09B_	PDB header: transcription regulator	Chain: B: PDB Molecule: putative transcriptional regulator;	PDBTitle: crystal structure of putative transcriptional regulator2 (jann_22dec04_contig27_revised_gene3569) from jannaschia3 sp. ccs1 at 2.81 a resolution

Links to external resources
Added to library: Sat Aug 28 20:58:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S D P I R P L V E A L N A E A P L K L W S V L V T C L G D V S R D G V I E V S G V A L S S F V E R X G L Q P Q A X R V A L H R L K R D G W V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E S R R L G R V G F H R L S D S A L T Q T R A V A G R I Y G P G A G P A P W H L A G X P P D A P D G L S L L P D T L S A T P I S R R F A L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T S
S
S S
T T G G G G S
T T S S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C G P L E D V P E D W L L T A P S G R G L P V W V Q D V V V E A G C E A E F K A L E R T L A Q I D K V P D T R L E R F T L R V L V L H A W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G S
T T S
S S
T T T
S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence R L I L R S S P A A E A A L G G A R A E I S C R A R V H Q L L D Q L G S V E P D W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	D	P	I	R	P	L	V	E	A	L	N	A	E	A	P	L	K	L	W	S	V	L	V	T	C	L	G	D	V	S	R	D	G	V	I	E	V	S	G	V	A	L	S	S	F	V	E	R	X	G	L	Q	P	Q	A	X	R	V	A	L	H	R	L	K	R	D	G	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												S																		T	T																T	T																T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	S	R	R	L	G	R	V	G	F	H	R	L	S	D	S	A	L	T	Q	T	R	A	V	A	G	R	I	Y	G	P	G	A	G	P	A	P	W	H	L	A	G	X	P	P	D	A	P	D	G	L	S	L	L	P	D	T	L	S	A	T	P	I	S	R	R	F	A	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																T	T					T	S					S										S	S		T	T	G	G	G	G	S		T	T	S					S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	G	P	L	E	D	V	P	E	D	W	L	L	T	A	P	S	G	R	G	L	P	V	W	V	Q	D	V	V	V	E	A	G	C	E	A	E	F	K	A	L	E	R	T	L	A	Q	I	D	K	V	P	D	T	R	L	E	R	F	T	L	R	V	L	V	L	H	A	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		G	G	G	S		T	T	S							S	S														T	T													T			S			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	R	L	I	L	R	S	S	P	A	A	E	A	A	L	G	G	A	R	A	E	I	S	C	R	A	R	V	H	Q	L	L	D	Q	L	G	S	V	E	P	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S										T	T