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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3kzsD_

Fold library idPDB HeaderMoleculeTitle
c3kzsD_PDB header: hydrolaseChain: D: PDB Molecule: glycosyl hydrolase family 5;PDBTitle: crystal structure of glycosyl hydrolase family 5 (np_809925.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution


Added to library: Wed Jan 5 12:11:58 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKTYIPWSNGKLVVSEEGRYLKHENGTPFFWLGETGWLLPERLNRDEAEYYLEQCKRRGYNVIQVQTLNN
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Known secondary structure (DSSP)




GGGG
S
TTSSSTTS
B


TT

TTT

S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VPSXNIYGQYSXTDGYNFKNINQKGVYGYWDHXDYIIRTAAKKGLYIGXVCIWGSPVSHGEXNVDQAKAY
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Known secondary structure (DSSP) SS
B
TT

BS
SSTT

TT


TT


TT

S
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKFLAERYKDEPNIIWFIGGDIRGDVKTAEWEALATSIKAIDKNHLXTFHPRGRTTSATWFNNAPWLDFN
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Known secondary structure (DSSP) TT
SSSS

TTSS

SS


BT
BTTT
TT

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence XFQSGHRRYGQRFGDGDYPIEENTEEDNWRFVERSXAXKPXKPVIDGEPIYEEIPHGLHDENELLWKDYD
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Known secondary structure (DSSP) B

S

TT

SSSS

SS
TT
TT
TTSSS


SS


BT
BTTSS
TTS
B

 .........290.........300.........310.........320.........330.........340.........350
Sequence VRRYAYWSVFAGSFGHTYGHNSIXQFIKPGVGGAYGAKKPWYDALNDPGYNQXKYLKNLXLTFPFFERVP
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Known secondary structure (DSSP) TTT
S

BTTTTTT

TTS

STT

S
TTTGGGSTTTTTTTTS

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DQSVIAGQNGERYDRAIATRGNDYLXVYNYTGRPXEVDFSKISGAKKNAWWYTTKDGKLEYIGEFDNGVH
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Known secondary structure (DSSP)
GGGS



GGG


SSSS


GGGSS
STTTTSS
 .........430.........440.........450.......
Sequence KFQHDSGYSSGNDHVLIVVDSSKDYVKKDCYQIDTHE
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Known secondary structure (DSSP)

SS
TTSS

TT

SS
TT

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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