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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3kw3B_

Fold library idPDB HeaderMoleculeTitle
c3kw3B_PDB header: isomeraseChain: B: PDB Molecule: alanine racemase;PDBTitle: crystal structure of alanine racemase from bartonella2 henselae with covalently bound pyridoxal phosphate


Added to library: Sun Aug 29 03:02:03 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PATAIATIDVRAIVANYRTLAQHVAPTECSAVVANAYGLGAHKIAPALYQAGCRTFFVAQIEEALQLKAV
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Known secondary structure (DSSP)

S
TTS


TTTTT
TT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPENVMIALLNGFPHKAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAIIQVDTNMSRLGLDKKEL
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Known secondary structure (DSSP) S
SS
TT


TT
TT

ST


B
SSS
SSSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence QKLIKNPTIFEKAEIKYILSHLANGEDASHSSNNKQLAAFKRVLAQLPTCKVSFANSGGIFLGSDFYFDL
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Known secondary structure (DSSP)

TS


SSTT
SS
TTS






TS
GGG
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VRPGIALYGVDPHGKHPTPLKAVVKVEAQVLQSRFIDAGIPVGYRESFMTRRPSTLATISIGYADGWPRI
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Known secondary structure (DSSP)

SGGGGT

TT

SS
S




SS
SGGG

SS
S

GGGT

GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LSNKGTVYFNGHKLPIVGHISMDSIIVDATDLDKKPQRGDWVELIGPHQPLEKVSTDTNTIPHEILTSLG
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Known secondary structure (DSSP) GTTT
TTB
S


SS

TT
SS


TT
BTTB
TS
T

 ........
Sequence KRYKRIYI
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Known secondary structure (DSSP) SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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