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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3kvaA_

Fold library idPDB HeaderMoleculeTitle
c3kvaA_PDB header: h3k4me3 binding protein, transferaseChain: A: PDB Molecule: jmjc domain-containing histone demethylationPDBTitle: structure of kiaa1718 jumonji domain in complex with alpha-2 ketoglutarate


Added to library: Sat Aug 28 18:10:47 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVQAGTRTFIKELRSRVFPSADEIIIKMHGSQLTQRYLEKHGFDVPIMVPKLDDLGLRLPSPTFSVMDVE
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Known secondary structure (DSSP)


TTS



BGGGT


TTT


S
S
SS
TTS

B


TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence RYVGGDKVIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWVEN
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Known secondary structure (DSSP) TTTSTTTTSSS
SS

TTSTTSTT
B


 .........150.........160.........170.........180.........190.........200.........210
Sequence YWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQ
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Known secondary structure (DSSP)

TT
SS




S

TT


GGG



TSGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence SEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDL
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Known secondary structure (DSSP) GGS
GGGGSS

TT

TT


SS
TT
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence FKFPFFEAICWFVAKNLLETLKELREDGFQPQTYLVQGVKALHTALKLWMKKELVSEHAFEIPDNVRPGH
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Known secondary structure (DSSP) GGSTTTTT



T
TTTGGGS
TT

 .........360......
Sequence LIKELSKVIRAIEEEN
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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