PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ks6A_

Fold library id	PDB Header	Molecule	Title
c3ks6A_	PDB header: hydrolase	Chain: A: PDB Molecule: glycerophosphoryl diester phosphodiesterase;	PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (17743486) from agrobacterium tumefaciens3 str. c58 (dupont) at 1.80 a resolution

Links to external resources
Added to library: Sat Aug 28 18:30:08 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G X T R I A S H R G G T L E F G D S T P H G F T A T A A X A L E E V E F D L H P T A D G A I V V H H D P T L D A T T D X T G A I V D X T L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T
T S S S S
T T S
S S S B S T T T B S
S B G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V K T A T I R Y G A G S H P X T L E E L C A L Y V D S H V N F R C E I K P G V D G L P Y E G F V A L V I A G L E R H S X L E R T T F S S F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T S T T
T T
S
T T S
T T T T
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L L A S X D E L W K A T T R P R L W L V S P S V L Q Q L G P G A V I E T A I A H S I H E I G V H I D T A D A G L X A Q V Q A A G L D F G C W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
G G G
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250

Sequence A A H T P S Q I T K A L D L G V K V F T T D R P T L A I A L R T E H R X E A S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	X	T	R	I	A	S	H	R	G	G	T	L	E	F	G	D	S	T	P	H	G	F	T	A	T	A	A	X	A	L	E	E	V	E	F	D	L	H	P	T	A	D	G	A	I	V	V	H	H	D	P	T	L	D	A	T	T	D	X	T	G	A	I	V	D	X	T	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T						T	T										T	S	S	S	S										T	T	S						S	S	S	B	S	T	T	T	B	S			S	B	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	K	T	A	T	I	R	Y	G	A	G	S	H	P	X	T	L	E	E	L	C	A	L	Y	V	D	S	H	V	N	F	R	C	E	I	K	P	G	V	D	G	L	P	Y	E	G	F	V	A	L	V	I	A	G	L	E	R	H	S	X	L	E	R	T	T	F	S	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	T	T	S	T	T														T	T		S											T	T	S				T	T												T	T		G	G	G						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	A	S	X	D	E	L	W	K	A	T	T	R	P	R	L	W	L	V	S	P	S	V	L	Q	Q	L	G	P	G	A	V	I	E	T	A	I	A	H	S	I	H	E	I	G	V	H	I	D	T	A	D	A	G	L	X	A	Q	V	Q	A	A	G	L	D	F	G	C	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S																										T	T								G	G	G												T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Sequence	A	A	H	T	P	S	Q	I	T	K	A	L	D	L	G	V	K	V	F	T	T	D	R	P	T	L	A	I	A	L	R	T	E	H	R	X	E	A	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S											T		S					S