PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3knwB_

Fold library id	PDB Header	Molecule	Title
c3knwB_	PDB header: transcription regulator	Chain: B: PDB Molecule: putative transcriptional regulator (tetr/acrr	PDBTitle: crystal structure of a putative transcriptional regulator2 (tetr/acrr family member) from putative transcriptional3 regulator (tetr/acrr family)

Links to external resources
Added to library: Sat Aug 28 21:02:46 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K R Q H I L D S G F H L V L R K G F V G V G L Q E I L K T S G V P K G S F Y H Y F E S K E A F G C E L L K H Y I S D Y Q I R L N Q L W T T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T
S T T
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T S A R D K L X N Y L Q C W V K S C L I V K X A A E V A D L S E D X R L I X N D G V K R L I A R X A D L I R I G Q Q E G S I Q T S V V P D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
T T T T T S
T S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . .

Sequence L A Q V I Y Q X Y L G A A L L S K L Y K H K A P L F Q A L E S T K X X L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	R	Q	H	I	L	D	S	G	F	H	L	V	L	R	K	G	F	V	G	V	G	L	Q	E	I	L	K	T	S	G	V	P	K	G	S	F	Y	H	Y	F	E	S	K	E	A	F	G	C	E	L	L	K	H	Y	I	S	D	Y	Q	I	R	L	N	Q	L	W	T	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	T	T									T	T				S	T	T						S																										S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	S	A	R	D	K	L	X	N	Y	L	Q	C	W	V	K	S	C	L	I	V	K	X	A	A	E	V	A	D	L	S	E	D	X	R	L	I	X	N	D	G	V	K	R	L	I	A	R	X	A	D	L	I	R	I	G	Q	Q	E	G	S	I	Q	T	S	V	V	P	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	T	T										T	T	T	T	T	S																														T	S	S				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Sequence	L	A	Q	V	I	Y	Q	X	Y	L	G	A	A	L	L	S	K	L	Y	K	H	K	A	P	L	F	Q	A	L	E	S	T	K	X	X	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	S