PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3klzE_

Fold library id	PDB Header	Molecule	Title
c3klzE_	PDB header: membrane protein	Chain: E: PDB Molecule: putative formate transporter 1;	PDBTitle: pentameric formate channel with formate bound

Links to external resources
Added to library: Sat Aug 28 17:42:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E G K A K K A A Y K S F L L A I S A G I Q I G I A F V F Y T V V T T G A H D M P Y G V T K L L G G L A F S L G L I L V V I T G G E L F T S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S
T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V L I L V A K A S G K I S W K E L V R N W T V V Y F G N L C G S I I L V F I M L A T R Q F M E D G G Q L G L N A M A I S Q H K L H H T F L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T G G G T G G G T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A F A L G L M C N I L V C L A V W M T F S A R S L T D K V M V L I L P V A M F V S S G F E H C I A N M F Q V P M A I G I K Y F A P E S F W A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . .

Sequence M T G A N I A Q Y A D L N F V N F I V N N L I P V T L G N I V G G G V F V G M W Y W L I Y L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G G T T
S T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	G	K	A	K	K	A	A	Y	K	S	F	L	L	A	I	S	A	G	I	Q	I	G	I	A	F	V	F	Y	T	V	V	T	T	G	A	H	D	M	P	Y	G	V	T	K	L	L	G	G	L	A	F	S	L	G	L	I	L	V	V	I	T	G	G	E	L	F	T	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																	T	T	T		T	T	S																								T				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	I	L	V	A	K	A	S	G	K	I	S	W	K	E	L	V	R	N	W	T	V	V	Y	F	G	N	L	C	G	S	I	I	L	V	F	I	M	L	A	T	R	Q	F	M	E	D	G	G	Q	L	G	L	N	A	M	A	I	S	Q	H	K	L	H	H	T	F	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	S																															T	G	G	G	T	G	G	G												T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	F	A	L	G	L	M	C	N	I	L	V	C	L	A	V	W	M	T	F	S	A	R	S	L	T	D	K	V	M	V	L	I	L	P	V	A	M	F	V	S	S	G	F	E	H	C	I	A	N	M	F	Q	V	P	M	A	I	G	I	K	Y	F	A	P	E	S	F	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T		S	S																		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Sequence	M	T	G	A	N	I	A	Q	Y	A	D	L	N	F	V	N	F	I	V	N	N	L	I	P	V	T	L	G	N	I	V	G	G	G	V	F	V	G	M	W	Y	W	L	I	Y	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			G	G	G	G	T	T		S								T