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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3khzA_

Fold library idPDB HeaderMoleculeTitle
c3khzA_PDB header: hydrolaseChain: A: PDB Molecule: putative dipeptidase sacol1801;PDBTitle: crystal structure of r350a mutant of staphylococcus aureus2 metallopeptidase (sapep/dape) in the apo-form


Added to library: Sat Aug 28 16:00:47 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDHIAGR
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Known secondary structure (DSSP)
TTTS

B

TTS

SSSTT
TT

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKK
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Known secondary structure (DSSP)
SS


B



TT
SS
TTS

SSSTTSTTTTT


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITF
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Known secondary structure (DSSP)

TT



TTSS


S
TT
SS
S


B










S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNA
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Known secondary structure (DSSP)
SSSB


SS
STT

TT
B

BTTS
TTSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence GLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINL
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Known secondary structure (DSSP) TTS
B
TTT
TTSGGGT


TTT
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence AYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTHQKNEYITKKQLFNA
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Known secondary structure (DSSP)
TT

TGGGT

B

GGG




SS
 .........430...
Sequence TSIYLEAIYSLCV
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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