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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3kfuI_

Fold library idPDB HeaderMoleculeTitle
c3kfuI_PDB header: ligase/rnaChain: I: PDB Molecule: aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;PDBTitle: crystal structure of the transamidosome


Added to library: Wed Jan 9 18:19:12 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YEAVIGLEVHLHLKTRTKMFCGCRADYFGAEPNTHTCPVCLGLPGALPVPNRVAVEHGLRLALALGAEVP
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Known secondary structure (DSSP)

B

SS
SSS
S



SS

TTSS

TTTTT
TT





T

 .........80.........90.........100.........110.........120.........130.........140
Sequence ERLVFHRKNYFYPDLPKNYQISQYDLPLGRGGSLPLGERRVRIKRLHLEEDAGKSLHLEGRTLLDLNRAG
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Known secondary structure (DSSP) S




TT
SSS
SSS
S
TT


TTTTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SPLIELVTEPDLKTPEEARLFLQRIQALVQTLGISDASPEEGKLRADVNVSVRLGTKVEIKNLNSFKSVQ
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Known secondary structure (DSSP)

TTB

TSB


GGGT







 .........220.........230.........240.........250.........260.........270.........280
Sequence RALEYEIRRQTEILRRGEKVKQATMGFEEGSGKTYPMRADYRYFPEPDLPPVAIPRDWLEEVRRSLPELP
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Known secondary structure (DSSP) TSS






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TTS



SS



 .........290.........300.........310.........320.........330.........340.........350
Sequence WEKEARYRALGIKEKDAEVLAYTPSLARFLDQALPLGLASPQALANWLLADVAGLLHERGLRLEETRLSP
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Known secondary structure (DSSP) TTTT

S
SSSSSS
TT

STTSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence EGLARLVGLFERGEVTSRVAKSLLPEVLEGQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTSS
TTT


TTTSS



T








 .........430.........440....
Sequence XXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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