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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3kfuF_

Fold library idPDB HeaderMoleculeTitle
c3kfuF_PDB header: ligase/rnaChain: F: PDB Molecule: aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;PDBTitle: crystal structure of the transamidosome


Added to library: Wed Jan 9 14:38:23 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MYEAVIGLEVHLHLKTRTKMFCGCRADYFGAEPNTHTCPVCLGLPGALPVPNRVAVEHGLRLALALGAEV
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B

SS
SSS
S



SS

TTSS

TTTTT
TT





T
 .........80.........90.........100.........110.........120.........130.........140
Sequence PERLVFHRKNYFYPDLPKNYQISQYDLPLGRGGSLPLGERRVRIKRLHLEEDAGKSLHLEGRTLLDLNRA
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S




TT
TTS
SSS
S
TT


TTTTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GSPLIELVTEPDLKTPEEARLFLQRIQALVQTLGISDASPEEGKLRADVNVSVRRVGEPLGTKVEIKNLN
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Known secondary structure (DSSP) T

TTB

TSB


GGGT


SSSS




 .........220.........230.........240.........250.........260.........270.........280
Sequence SFKSVQRALEYEIRRQTEILRRGEKVKQATMGFEEGSGKTYPMADYRYFPEPDLPPVAIPRDWLEEVRRS
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TSS






TTTT








TTS



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPELPWEKEARYRALGIKEKDAEVLAYTPSLARFLDQALPLGLASPQALANWLLADVAGLLHERGLRLEE
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TTTT

S
TTSSSS
TT

STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TRLSPEGLARLVGLFERGEVTSRVAKSLLPEVLEGQDPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SS

TTSS
TTT







SSS
GGGSS

T
 .........430.........440.......
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) T





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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