PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3k94A_

Fold library id	PDB Header	Molecule	Title
c3k94A_	PDB header: transferase	Chain: A: PDB Molecule: thiamin pyrophosphokinase;	PDBTitle: crystal structure of thiamin pyrophosphokinase from2 geobacillus thermodenitrificans, northeast structural3 genomics consortium target gtr2

Links to external resources
Added to library: Sat Aug 28 15:40:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X I I H I V G G G P R E L L P D L R F Y D G E D V W V G V D R G T X T L L E A G F R P V R A F G D F D S L P A E D V V K L Q Q A F P D L D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G S
G G G G
T T
T T T
S S
G G G S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W P A E K D K T D X E I A L D W A V E Q T A R I R L F G A T G G R L D H L F G N V E L L L K Y A D R P I E I V D R Q N V L T V H L P G T Y T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T B
T T
S
S S S S T T T S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V X Y D A R Y C Y V S Y I P V S E T V A E F T L T G F K Y P L T N H I S R G S T L I S N E L I Q S S G T F S F S E G I L X X I R S S D S S C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S B S
S B S S
T T T
B
S S S B S
T T

.

Sequence L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	I	I	H	I	V	G	G	G	P	R	E	L	L	P	D	L	R	F	Y	D	G	E	D	V	W	V	G	V	D	R	G	T	X	T	L	L	E	A	G	F	R	P	V	R	A	F	G	D	F	D	S	L	P	A	E	D	V	V	K	L	Q	Q	A	F	P	D	L	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		G	G	G	S			G	G	G	G			T	T						T	T									T				S				S		G	G	G	S													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	P	A	E	K	D	K	T	D	X	E	I	A	L	D	W	A	V	E	Q	T	A	R	I	R	L	F	G	A	T	G	G	R	L	D	H	L	F	G	N	V	E	L	L	L	K	Y	A	D	R	P	I	E	I	V	D	R	Q	N	V	L	T	V	H	L	P	G	T	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B	T	T	B												T	T								S		S	S	S	S														T	T	T	S							T	T								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	X	Y	D	A	R	Y	C	Y	V	S	Y	I	P	V	S	E	T	V	A	E	F	T	L	T	G	F	K	Y	P	L	T	N	H	I	S	R	G	S	T	L	I	S	N	E	L	I	Q	S	S	G	T	F	S	F	S	E	G	I	L	X	X	I	R	S	S	D	S	S	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T										S	S			B	S					S	B	S	S								T	T	T							B		S	S							S	B	S										T	T
	.
Sequence	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)