Fold library entry viewer: c3k8kB_

Added to library: Sat Aug 28 18:00:54 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	W	T	A	L	T	A	S	P	D	T	W	D	E	T	K	R	A	D	I	S	Y	Q	L	L	L	Y	S	F	A	D	S	D	G	D	G	Y	G	D	L	N	G	V	T	Q	K	L	D	Y	L	N	Q	L	G	V	K	A	L	W	L	S	P	I	H	P	C	X	S	Y	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S				S								T	T	T	S			S	S	S	S	S	S								T	T							T	T		S								S		B	S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	D	V	T	D	Y	T	K	V	N	P	Q	L	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K	I	Y	L	D	Y	V	X	N	H	T	G	T	A	H	P	W	F	T	E	A	S	S	S	S	E	S	P	Y	R	N	Y	Y	S	F	S	E	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	B	S		T	T	S			T	T	T																T	T										S				T	T	S							T	T		T	T	S	G	G	G	G	G	B				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	T	D	I	A	A	G	K	I	A	X	I	T	Q	E	G	A	A	G	Y	N	A	A	E	W	F	Q	V	S	D	E	T	A	A	V	K	G	L	L	K	F	T	L	D	W	S	N	A	P	S	P	I	L	V	V	S	T	G	T	K	A	D	E	D	N	P	D	T	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		S	T	T			S	S	G	G	G	G			G	G	G				S		S																S	S	T	T	S									S	S				S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	N	A	K	Y	L	Y	Y	G	E	D	I	C	K	K	F	Y	D	K	G	N	N	I	Y	E	L	T	V	D	F	E	S	T	W	G	L	L	I	R	T	S	N	A	S	F	W	P	S	G	T	K	Y	G	A	S	S	S	S	E	K	L	A	L	N	K	D	F	K	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							T	T	T									S	S	S											S	S						S			S	S	S			T	T				B	B	S	S	T	T			B		T	T	S					B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	A	G	N	P	A	N	I	X	F	D	S	Q	Q	I	T	Y	F	H	S	H	F	C	T	D	W	F	A	D	L	N	Y	G	P	V	D	Q	A	G	E	S	P	A	Y	Q	A	I	A	D	A	A	K	G	W	I	A	R	G	V	D	G	L	R	L	D	A	V	K	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S		B		B		B	T	T									T	T	S		T	T				B				S	T	T	T	G	G	G																	T	T							T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	H	S	E	T	S	E	E	N	P	R	F	L	K	X	F	Y	E	D	X	N	A	Y	Y	K	Q	K	G	H	T	D	D	F	Y	X	I	G	E	V	L	S	E	Y	D	K	V	A	P	Y	Y	K	G	L	P	A	L	F	E	F	S	F	W	Y	R	L	E	W	G	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S	S	S																			T	T	T			S										S						G	G	G	G	G	T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	S	T	G	C	Y	F	A	K	D	I	L	S	Y	Q	Q	K	Y	A	N	Y	R	S	D	Y	I	E	A	T	K	L	S	N	H	D	E	D	R	T	S	S	K	L	G	K	S	A	D	K	C	K	L	A	A	A	V	L	L	T	S	A	G	H	P	Y	I	Y	Y	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T	T														T	T		T	T							S			T	T	S							T	T	T															S	S	S						T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	L	G	L	Y	G	T	K	D	N	G	D	E	Y	V	R	S	P	X	L	W	G	D	S	Y	T	T	N	Y	T	D	K	T	D	A	T	V	S	K	N	V	K	T	V	A	D	Q	Q	A	D	T	H	S	L	L	N	I	Y	F	S	L	T	R	L	R	N	T	Y	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T					S	T	T		G	G	G	G	S						S	S	T	T						S								T	T	S							T	T		T	T	S													T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	A	E	G	N	X	T	K	H	S	V	Y	N	E	S	Q	E	K	D	Y	K	P	I	A	A	W	Y	X	T	K	D	N	E	K	L	L	V	I	H	N	F	G	G	T	A	X	Q	L	P	L	T	D	K	I	E	K	V	L	F	V	N	G	E	T	Q	Q	N	T	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T							S	S	S	S	G	G	G	T	T	T			S									T	T										S	S	S								S										S	S						T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Sequence	D	S	Y	T	L	K	L	G	G	Y	A	S	V	V	F	K	L	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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