Fold library entry viewer: c3k6sC_

Added to library: Sat Aug 28 21:28:41 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	N	L	D	T	E	E	L	T	A	F	R	V	D	S	A	G	F	G	D	S	V	V	Q	Y	A	N	S	W	V	V	V	G	A	P	Q	K	I	T	A	A	N	Q	T	G	G	L	Y	Q	C	G	Y	S	T	G	A	C	E	P	I	G	L	Q	V	P	P	E	A	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S	S	S									S	S		S	S						S	T	T							T	T				T	T	T										T	T	T	T											S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	S	L	G	L	S	L	A	S	T	T	S	P	S	Q	L	L	A	C	G	P	T	V	H	H	E	C	G	R	N	M	Y	L	T	G	L	C	F	L	L	G	P	T	Q	L	T	Q	R	L	P	V	S	R	Q	E	C	P	R	S	S	F	E	L	E	M	A	Q	E	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S						T	T	T	T							T	T						S	S												S	S	S			B			S													S	S	S	B			T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	A	V	F	T	P	D	G	P	V	L	G	A	V	G	S	F	T	W	S	G	G	A	F	L	Y	P	P	N	M	S	P	T	F	I	N	M	S	Q	E	N	V	D	M	R	D	S	Y	L	G	Y	S	T	E	L	A	L	W	K	G	V	Q	S	L	V	L	G	A	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T							S		S	T	T	T	T	B							S	S	S									S	S						S			B	T	S	S							S	S	S								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	Q	H	T	G	K	A	V	I	F	T	Q	V	S	R	Q	W	R	M	K	A	E	V	T	G	T	Q	I	G	S	Y	F	G	A	S	L	C	S	V	D	V	D	S	D	G	S	T	D	L	V	L	I	G	A	P	H	Y	Y	E	Q	T	R	G	G	Q	V	S	V	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T										T	T	T										S	S	T	T	S		T	T	S							S	S	S	S	S	S									S	S			S	S				B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	P	R	G	W	R	R	W	W	C	D	A	V	L	Y	G	E	Q	G	H	P	W	G	R	F	G	A	A	L	T	V	L	G	D	V	N	G	D	K	L	T	D	V	V	I	G	A	P	G	E	E	E	N	R	G	A	V	Y	L	F	H	G	V	L	G	P	S	I	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T	T				S		S	S						S		S	S			B	T	S								S	S	S	S	S									T	T	T	T	T	S			B						B		S	S	S		B		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	H	S	Q	R	I	A	G	S	Q	L	S	S	R	L	Q	Y	F	G	Q	A	L	S	G	G	Q	D	L	T	Q	D	G	L	V	D	L	A	V	G	A	R	G	Q	V	L	L	L	R	T	R	P	V	L	W	V	G	V	S	M	Q	F	I	P	A	E	I	P	R	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	B			B	T	T	S	S		T	T		S	S												S		S	S	S								S	S							B			B										S	S		S			S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	E	C	R	E	Q	V	V	S	E	Q	T	L	V	Q	S	N	I	C	L	Y	I	D	K	R	S	K	N	L	L	G	S	R	D	L	Q	S	S	V	T	L	D	L	A	L	D	P	G	R	L	S	P	R	A	T	F	Q	E	T	K	N	R	S	L	S	R	V	R	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B		T	T		S	S																		T	T	T		S	S	T	T	T	S											S	T	T	S	S	S						T	T	T		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	L	K	A	H	C	E	N	F	N	L	L	L	P	S	C	V	E	D	S	V	T	P	I	T	L	R	L	N	F	T	L	V	G	K	P	L	L	A	F	R	N	L	R	P	M	L	A	A	D	A	Q	R	Y	F	T	A	S	L	P	F	E	K	N	C	G	A	D	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S												S	B		S			S	S																S	S	S	S	S				B			S	S																	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	C	Q	D	N	L	G	I	S	F	S	F	P	G	L	K	S	L	L	V	G	S	N	L	E	L	N	A	E	V	M	V	W	N	D	G	E	D	S	Y	G	T	T	I	T	F	S	H	P	A	G	L	S	Y	R	Y	V	A	E	G	Q	K	Q	G	Q	L	R	S	L	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			S				S	S														S	S		B	S	S									T	T										T	T			S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	C	D	S	A	P	V	G	S	Q	G	T	W	S	T	S	C	R	I	N	H	L	I	F	R	G	G	A	Q	I	T	F	L	A	T	F	D	V	S	P	K	A	V	L	G	D	R	L	L	L	T	A	N	V	S	S	E	N	N	T	P	R	T	S	K	T	T	F	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S	S									T	T	S		B		T	T													T	T					S										B	T	T	B			S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	L	P	V	K	Y	A	V	Y	T	V	V	S	S	H	E	Q	F	T	K	Y	L	N	F	S	E	S	E	E	K	E	S	H	V	A	M	H	R	Y	Q	V	N	N	L	G	Q	R	D	L	P	V	S	I	N	F	W	V	P	V	E	L	N	Q	E	A	V	W	M	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S								S			S	S																	S	S	S														S	T	T			S	B		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	V	S	H	P	Q	N	P	S	L	R	C	S	S	E	K	I	A	P	P	A	S	D	F	L	A	H	I	Q	K	N	P	V	L	D	C	S	I	A	G	C	L	R	F	R	C	D	V	P	S	F	S	V	Q	E	E	L	D	F	T	L	K	G	N	L	S	F	G	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S																													T	T	T	S														T	T											B		S	G	G	G
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
Sequence	R	Q	I	L	Q	K	K	V	S	V	V	S	V	A	E	I	T	F	D	T	S	V	Y	S	Q	L	P	G	Q	E	A	F	M	R	A	Q	T	T	T	V	L	E	K	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T	T		S	S													T	T	T				S	S	S				T	T

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PDB structure

FASTA sequence

Hidden Markov model

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