PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3k6qB_

Fold library id	PDB Header	Molecule	Title
c3k6qB_	PDB header: ligand binding protein	Chain: B: PDB Molecule: putative ligand binding protein;	PDBTitle: crystal structure of an antitoxin part of a putative toxin/antitoxin2 system (swol_0700) from syntrophomonas wolfei subsp. wolfei at 1.80 a3 resolution

Links to external resources
Added to library: Sun Aug 29 03:38:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X Q T I N A T E I R N N F S Y Y I D T V V R D K P I A V K R N R D V L L F F S E Q I I K D L L Q D L K I H A E L S K E D G I I I G T I D G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T T
T T G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . .

Sequence D L V V S G E S E Q E V I Q K L A E D L L E Y A Q D Y X N D F K L F Y N A P N R K T H Y P Y I L K V L L S S N I D E V K G Y I Y A E X V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S T T S T T
S T T S S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	Q	T	I	N	A	T	E	I	R	N	N	F	S	Y	Y	I	D	T	V	V	R	D	K	P	I	A	V	K	R	N	R	D	V	L	L	F	F	S	E	Q	I	I	K	D	L	L	Q	D	L	K	I	H	A	E	L	S	K	E	D	G	I	I	I	G	T	I	D	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T											T								T	T															T	T	T											T	T							G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Sequence	D	L	V	V	S	G	E	S	E	Q	E	V	I	Q	K	L	A	E	D	L	L	E	Y	A	Q	D	Y	X	N	D	F	K	L	F	Y	N	A	P	N	R	K	T	H	Y	P	Y	I	L	K	V	L	L	S	S	N	I	D	E	V	K	G	Y	I	Y	A	E	X	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S	S																						T						T	S	T	T		S	T	T										S	S	S						T	T