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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3k3pA_

Fold library idPDB HeaderMoleculeTitle
c3k3pA_PDB header: ligaseChain: A: PDB Molecule: d-alanine--d-alanine ligase;PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans


Added to library: Sat Sep 18 09:10:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSDKLMTNDTIIAS
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Known secondary structure (DSSP)

SSTTS
TTT
TTS
SS







TTS

GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence QKIKPSDIYEEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQV
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Known secondary structure (DSSP) G
GGGG

TT


STTTSSSTT

BSS






B
 .........150.........160.........170.........180.........190.........200.........210
Sequence AYVALIEGEPLESKLAEVEEKLIYPVFVKPANISKAENRTDLKQAIALALKYDSRVLIEQGVDAREIEVG
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Known secondary structure (DSSP)
TTS


SS


SS
S


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILGNTDVKTTLPGEIVTMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTEDGKVYLNELNTMP
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Known secondary structure (DSSP) SSS





SS



TT


TT

SS
 .........290.........300.........310.......
Sequence GFTSMYPLLWENMGLSYSVLIEELVSLAKEMFDKRES
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Known secondary structure (DSSP)



TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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