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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3k2nB_

Fold library idPDB HeaderMoleculeTitle
c3k2nB_PDB header: transcription regulatorChain: B: PDB Molecule: sigma-54-dependent transcriptional regulator;PDBTitle: the crystal structure of sigma-54-dependent transcriptional2 regulator domain from chlorobium tepidum tls


Added to library: Sat Aug 28 16:46:29 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNAALKLXQYIGDAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRERREASVFFEXLRFELPEQLRH
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Known secondary structure (DSSP)



TTT


STTTT
SS


GGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence QTRSIAGTWLEGHLDDRTVTVASIARDIPSFGADGAPLLWTLHELGXRQIVLSPLRSGGRVIGFLSFVSA
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Known secondary structure (DSSP) S
TTSTTGGGTT

S
TTTS
TTTTSTT
TT

TTS
 .........150.........160.........170.......
Sequence EEKLWSDGDKSLLSGVSSSIAIAVSNALAYEELRQRE
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Known secondary structure (DSSP) S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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