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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3jywD_

Fold library idPDB HeaderMoleculeTitle
c3jywD_PDB header: ribosomeChain: D: PDB Molecule: 60s ribosomal protein l4(b);PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution


Added to library: Sat Aug 28 15:59:52 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARI
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Known secondary structure (DSSP)


TTT
S
S


GGGGS


TTS





SSTT
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TTSSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEK
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Known secondary structure (DSSP) SSSSSS
SS


SSS

SSSTTS

SS


SSS






STTSS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYAEDNG
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Known secondary structure (DSSP)
SS
S

TTSTT

ST

TTTTT

S




STSS
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S
SSSSS
 .........220.........230.........240.........250.......
Sequence IVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQV
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Known secondary structure (DSSP)

STTTSSTT

SSS

STTTSSSSS




S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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