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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jywC_

Fold library idPDB HeaderMoleculeTitle
c3jywC_PDB header: ribosomeChain: C: PDB Molecule: 60s ribosomal protein l3;PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution


Added to library: Sun Aug 29 00:02:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVE
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Known secondary structure (DSSP)






S
S
S
S




SSS


SS




SSSSSB




B



B

SSTT
TTTT

B

 .........80.........90.........100.........110.........120.........130.........140
Sequence AVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAQDGAGI
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Known secondary structure (DSSP)







B

SSSS

S

SS

STTTTTSS


SSS



S

S

S
S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEM
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Known secondary structure (DSSP) TTTTS
B





TTSS



S

SSTTGGGTTTTSB

STTT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYR
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Known secondary structure (DSSP)

B

S

T




SS

SS
SS

S
SS
SSSS


TT






B
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEV
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Known secondary structure (DSSP) SSS





SS
SS
S
BSSSSS

SSS



S
SS

S

SS



SS

S



SS

 .........360..
Sequence SLKWIDTASKFG
Predicted secondary structure






SS confidence











Known secondary structure (DSSP)






S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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