PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3jwpA_

Fold library id	PDB Header	Molecule	Title
c3jwpA_	PDB header: transcription	Chain: A: PDB Molecule: transcriptional regulatory protein sir2	PDBTitle: crystal structure of plasmodium falciparum sir2a (pf13_0152)2 in complex with amp

Links to external resources
Added to library: Sat Aug 28 23:53:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K K D T Q S I T L E E L A K I I K K C K H V V A L T G S G T S A E S N I P S F R G S S N S I W S K Y D P R I Y G T I W G F W K Y P E K I W E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T G G G T
B S S S S S S B G G G T S
S B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V I R D I S S D Y E I E I N N G H V A L S T L E S L G Y L K S V V T Q N V D G L H E A S G N T K V I S L H G N V F E A V C C T C N K I V K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S
T
S
T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N K I X L Q K T S H F X H Q L P P E C P C G G I F K P N I I L F G E V V S S D L L K E A E E E I A K C D L L L V I G T S S T V S T A T N L C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S S T T T S S S
B
T T S
B
B T
T
S S
S S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . .

Sequence H F A C K K K K K I V E I N I S K T Y I T N K X S D Y H V C A K F S E L T K V A N I L K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S S T T T T
S
G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	D	T	Q	S	I	T	L	E	E	L	A	K	I	I	K	K	C	K	H	V	V	A	L	T	G	S	G	T	S	A	E	S	N	I	P	S	F	R	G	S	S	N	S	I	W	S	K	Y	D	P	R	I	Y	G	T	I	W	G	F	W	K	Y	P	E	K	I	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S								G	G	G	T	G	G	G	T			B	S	S	S	S	S	S	B	G	G	G	T	S						S	B								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	I	R	D	I	S	S	D	Y	E	I	E	I	N	N	G	H	V	A	L	S	T	L	E	S	L	G	Y	L	K	S	V	V	T	Q	N	V	D	G	L	H	E	A	S	G	N	T	K	V	I	S	L	H	G	N	V	F	E	A	V	C	C	T	C	N	K	I	V	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																	T	T										S	S							T		S					T	T									T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	K	I	X	L	Q	K	T	S	H	F	X	H	Q	L	P	P	E	C	P	C	G	G	I	F	K	P	N	I	I	L	F	G	E	V	V	S	S	D	L	L	K	E	A	E	E	E	I	A	K	C	D	L	L	L	V	I	G	T	S	S	T	V	S	T	A	T	N	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T	S	S	T	T	T	S	S	S		B		T	T	S		B								B	T																	T		S						S			S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Sequence	H	F	A	C	K	K	K	K	K	I	V	E	I	N	I	S	K	T	Y	I	T	N	K	X	S	D	Y	H	V	C	A	K	F	S	E	L	T	K	V	A	N	I	L	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								S	S			S	S	T	T	T	T		S							G	G	G	G