PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3jvcA_

Fold library id	PDB Header	Molecule	Title
c3jvcA_	PDB header: lipid binding protein	Chain: A: PDB Molecule: conserved hypothetical membrane lipoprotein;	PDBTitle: crystal structure of the lipoprotein_17 domain from2 q9pra0_urepa protein of ureaplasma parvum. northeast3 structural genomics consortium target uur17a.

Links to external resources
Added to library: Sat Aug 28 16:02:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F K K I V N N I R L K D T F D F K L A A F P N Q N Y D Q L L P S Q I Y K N Y Y Q G I E I Q Q H K Y Q N E L D I K I I N F L Y P D G D F G S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B T T T S S S T T
G G G S
T T G G G
S
T T T
T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . .

Sequence N K N G T L K L S L M L T D K K N N Q V Y Y K L L E V S G F K S N P Y G V D E N G T I P G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T
S
T T
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	K	K	I	V	N	N	I	R	L	K	D	T	F	D	F	K	L	A	A	F	P	N	Q	N	Y	D	Q	L	L	P	S	Q	I	Y	K	N	Y	Y	Q	G	I	E	I	Q	Q	H	K	Y	Q	N	E	L	D	I	K	I	I	N	F	L	Y	P	D	G	D	F	G	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			B	T	T	T						S	S	S	T	T			G	G	G	S							T	T	G	G	G								S		T	T	T											T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Sequence	N	K	N	G	T	L	K	L	S	L	M	L	T	D	K	K	N	N	Q	V	Y	Y	K	L	L	E	V	S	G	F	K	S	N	P	Y	G	V	D	E	N	G	T	I	P	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T											T	T	T													S				T	T				T	T				T	T