PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3jsyA_

Fold library id	PDB Header	Molecule	Title
c3jsyA_	PDB header: ribosomal protein	Chain: A: PDB Molecule: acidic ribosomal protein p0 homolog;	PDBTitle: n-terminal fragment of ribosomal protein l10 from methanococcus2 jannaschii

Links to external resources
Added to library: Sun Aug 29 04:06:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M A P W K I E E V K T L K G L I K S K P V V A I V D M M D V P A P Q L Q E I R D K I R D K V K L R M S R N T L I I R A L K E A A E E L N N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T T
T T
G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L A E L A N Y V E R G A A I L V T D M N P F K L Y K L L E E N K S P A P V R G G Q I A P C D I K V E K G S T G M P P G P F L G E L K S V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G G G G G
S S S S
S
T T
B
S S
S
S S T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I P A A I E K G K I A I K E D K V V V K K G E V V S P K L A A V L D R L G I K P I K V G L N I L A V Y E D G I I Y T P D V L K V D E E K L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T S B
T T
S
T T
S
T T

. . .

Sequence A D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	P	W	K	I	E	E	V	K	T	L	K	G	L	I	K	S	K	P	V	V	A	I	V	D	M	M	D	V	P	A	P	Q	L	Q	E	I	R	D	K	I	R	D	K	V	K	L	R	M	S	R	N	T	L	I	I	R	A	L	K	E	A	A	E	E	L	N	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S									S														T	T	T																						T	T		G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	A	E	L	A	N	Y	V	E	R	G	A	A	I	L	V	T	D	M	N	P	F	K	L	Y	K	L	L	E	E	N	K	S	P	A	P	V	R	G	G	Q	I	A	P	C	D	I	K	V	E	K	G	S	T	G	M	P	P	G	P	F	L	G	E	L	K	S	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	G	G	G	G			S	S							S	S												S								T	T		B		S	S						S							S	S	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	P	A	A	I	E	K	G	K	I	A	I	K	E	D	K	V	V	V	K	K	G	E	V	V	S	P	K	L	A	A	V	L	D	R	L	G	I	K	P	I	K	V	G	L	N	I	L	A	V	Y	E	D	G	I	I	Y	T	P	D	V	L	K	V	D	E	E	K	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T						S							T	T	S	B												T	T							S									T	T													S		T	T
	.	.	.
Sequence	A	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S