PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3jr7A_

Fold library id	PDB Header	Molecule	Title
c3jr7A_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized egv family protein cog1307;	PDBTitle: the crystal structure of the protein of degv family cog13072 with unknown function from ruminococcus gnavus atcc 29149

Links to external resources
Added to library: Sat Aug 28 16:01:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K D X S Y K V I V D S C G E F T P E X K A D G G F E H V A L G I Q I E D T Q W T D D D S L K Q E E L L L K I A E S T S C A K T S C P S P E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
T T
S T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y X E S Y H C D A E R I Y V V T L S A E L S G S Y N S A V L G K N L Y E E E Y G E K Q I H V F N S R S A S V G E T L I A L K V Q Q C E K A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T T
S
S S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence X T F E E V V E S V E C Y I E E Q H T Y F V L E N L D T L R K N G R L T G I K S A G A L N I K P I X G S T P Q G T I C Q K E K A R G X K K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S T T
T T
T T S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . .

Sequence L V K X A D C V A A D V V N A G D K I L A I A H C N C E E R A K E V Q R L L K E R F A V K S S F I V D T S G I S T V Y A N D G G I I V V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G
S S
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	D	X	S	Y	K	V	I	V	D	S	C	G	E	F	T	P	E	X	K	A	D	G	G	F	E	H	V	A	L	G	I	Q	I	E	D	T	Q	W	T	D	D	D	S	L	K	Q	E	E	L	L	L	K	I	A	E	S	T	S	C	A	K	T	S	C	P	S	P	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S										S	S											T	T						S	T	T	S													S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	X	E	S	Y	H	C	D	A	E	R	I	Y	V	V	T	L	S	A	E	L	S	G	S	Y	N	S	A	V	L	G	K	N	L	Y	E	E	E	Y	G	E	K	Q	I	H	V	F	N	S	R	S	A	S	V	G	E	T	L	I	A	L	K	V	Q	Q	C	E	K	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S		S							S		T	T	T		S																											S	S		T																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	X	T	F	E	E	V	V	E	S	V	E	C	Y	I	E	E	Q	H	T	Y	F	V	L	E	N	L	D	T	L	R	K	N	G	R	L	T	G	I	K	S	A	G	A	L	N	I	K	P	I	X	G	S	T	P	Q	G	T	I	C	Q	K	E	K	A	R	G	X	K	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S								T	T		S	T	T							T	T									T	T	S										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Sequence	L	V	K	X	A	D	C	V	A	A	D	V	V	N	A	G	D	K	I	L	A	I	A	H	C	N	C	E	E	R	A	K	E	V	Q	R	L	L	K	E	R	F	A	V	K	S	S	F	I	V	D	T	S	G	I	S	T	V	Y	A	N	D	G	G	I	I	V	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	G	G	G								S	S																			S																	T	T