PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3jcuS_

Fold library id	PDB Header	Molecule	Title
c3jcuS_	3.20	PDB header: membrane protein	Chain: S: PDB Molecule: chlorophyll a-b binding protein 26 kd (cp26);

Links to external resources
Added to library: Sat May 28 08:28:55 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L A K W Y G P D R R I F L P D G L L D R D D I P E Y L N G E V P G D Y G Y D P F G L G K K P E D F A K Y Q A F E L I H A R W A M L G A A G C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S T T S
S S
S S S
S S
S
S S S
T T S T T
S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V I P E A F N K F G A N C G P E A V W F K T G A L L L D G N T L N Y F G K N I P I N L V L A V V A E V V L L G G A E Y Y R I T N G L D F E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S S
S S
S T T T T T G G G S S S
S S S S
S
S S S
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K L H P G G P F D P L G L A K D P D Q A A L L K V K E I K N G R L A M F S M F A F F I Q A Y V T G Q G P V E N L S A H L S D P F G N N L L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T S
S S
T T
S
T T T S S

. . . .

Sequence V I G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	A	K	W	Y	G	P	D	R	R	I	F	L	P	D	G	L	L	D	R	D	D	I	P	E	Y	L	N	G	E	V	P	G	D	Y	G	Y	D	P	F	G	L	G	K	K	P	E	D	F	A	K	Y	Q	A	F	E	L	I	H	A	R	W	A	M	L	G	A	A	G	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S	T	T	S			S	S		S	S	S		S	S		S			S	S	S		T	T	S	T	T			S			T	T					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	I	P	E	A	F	N	K	F	G	A	N	C	G	P	E	A	V	W	F	K	T	G	A	L	L	L	D	G	N	T	L	N	Y	F	G	K	N	I	P	I	N	L	V	L	A	V	V	A	E	V	V	L	L	G	G	A	E	Y	Y	R	I	T	N	G	L	D	F	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	S	S	S		S	S			S	T	T	T	T	T	G	G	G	S	S	S				S	S	S	S		S																								S	S	S			S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	H	P	G	G	P	F	D	P	L	G	L	A	K	D	P	D	Q	A	A	L	L	K	V	K	E	I	K	N	G	R	L	A	M	F	S	M	F	A	F	F	I	Q	A	Y	V	T	G	Q	G	P	V	E	N	L	S	A	H	L	S	D	P	F	G	N	N	L	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	T	T	S		S	S				T	T																																	S													T	T	T	S	S
	.	.	.	.
Sequence	V	I	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T