Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jcrV_

Fold library idPDB HeaderMoleculeTitle
c3jcrV_7.00PDB header: splicingChain: V: PDB Molecule: hsad1;


Added to library: Sat Mar 12 09:05:29 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYC
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)
GGGGG

STT


SS



TTT


SS
TTT



SSTTSS



TTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence LPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALS
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) SSS

B
SS
STS



S
SS
SS


B
SS

B

SS



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQIT
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TS

SSS
SS

TT



T
SS
SSS


TTSSS





 .........220.........230.........240.........250.........260.........270.........280
Sequence KQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKAEEKEQQETMVESTFMYLTLDLPTAP
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S


S
SSS
ST



STTTT





SS





 .........290.........300.........310.........320.........330.........340.........350
Sequence LYKDEKEQLIIPQVPLFNILAKFNGKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) SS


SSSTTS


BTTTTSS


TTSSS



S



SSSSS







B


 .........360.........370.........380.........390.........400.........410.........420
Sequence TNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLS
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
TTS



SSS




SS


TTTTTT
GGGGGGS
 .........430.
Sequence EAYIQIWKRRD
Predicted secondary structure




SS confidence










Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D