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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jckA_

Fold library idPDB HeaderMoleculeTitle
c3jckA_3.50PDB header: hydrolaseChain: A: PDB Molecule: 26s proteasome regulatory subunit rpn3;


Added to library: Sat Jan 23 08:35:30 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEINCFMHLLVQLFLWDSKELEQL
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Known secondary structure (DSSP)
TTT
SSTTTTSS



T

 .........80.........90.........100.........110.........120.........130.........140
Sequence VEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH
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Known secondary structure (DSSP) T
STT


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIA
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Known secondary structure (DSSP)
TT
ST




SS

TT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AIRKAPHNSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQSNMQKSLLPYYHLTKAVKLGDLKKFTSTIT
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Known secondary structure (DSSP) SS

SSSTTT



SSSGGGGTST
 .........290.........300.........310.........320.........330.........340.........350
Sequence KYKQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTVEYMVSRAIRDGVIEAK
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Known secondary structure (DSSP) SSTTTTT
ST

S
TTSS
 .........360.........370.........380.........390.......
Sequence INHEDGFIETTELLNIYDSEDPQQVFDERIKFANQLHDEYLVSMRYP
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Known secondary structure (DSSP) TTTT





TTSSTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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