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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jbxB_

Fold library idPDB HeaderMoleculeTitle
c3jbxB_PDB header: recombination/dnaChain: B: PDB Molecule: v(d)j recombination-activating protein 2;PDBTitle: cryo-electron microscopy structure of rag signal end complex (c22 symmetry)


Added to library: Sat Dec 12 08:14:09 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAISFSNNSSYLP
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Known secondary structure (DSSP)

B

S

TT

SS

SSS

SSS

TTSSS
TT

B
TT




 .........80.........90.........100.........110.........120.........130.........140
Sequence PLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKVTLRCEEKELVGDVPSARYGH
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SS

S
SS




TTT




SSS




SS


S
BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVVDCPPQVYLIDLEFGCCTAHTLPELTDGQSFHVAL
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Known secondary structure (DSSP) TT



TTT

SSSSS


S

SSSS


TT

S


S

 .........220.........230.........240.........250.........260.........270.........280
Sequence ARQDCVYFLGGHILSSDCRPSRLIRLHVELLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSE
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Known secondary structure (DSSP) TT



BTTTTB





SS

SS



BS



SSS



BSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TQKRMECTYVGLDDVGVHMESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSF
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Known secondary structure (DSSP) SS


S
SS







S

TT


SS

S
S
 .
Sequence Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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