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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jb9c_

Fold library idPDB HeaderMoleculeTitle
c3jb9c_PDB header: rna binding protein/rnaChain: C: PDB Molecule: u5 snrna;PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution


Added to library: Sat Sep 26 08:32:26 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTIDEMVQEEKLLNKQRKYGQNYEYAKQIAKDKTYSNNLDYLDENAGKLSNRMKRGDVSLAQISSGGDLK
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Known secondary structure (DSSP)


SS
SS



SST


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T
ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence KINHVLDTCPLCLNYETQPLAPVISLSHRAYVSLPTQPELAKYHCLIVPTGHRINTLSCDEDEWDEIRNF
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SS

S
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SS
SSTT
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SSTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MKCIALMFDSMNLGVIFYENAPSPQRYMHTAIECIPVSKRILSLAPAYFREALSTSDEEWSQHRKIIDTL
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Known secondary structure (DSSP) TT


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TTS
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 .........220.........230.........240.........250.........260.........270.........280
Sequence EGSKKYGKWAFRKMMVKELGYFHVWFSIDGGYGHVVEDEKAWGRHDQVPRQVFASMLNLPPEVIRRKGSW
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SSSSS
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TT

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 .........290.........300
Sequence TGKKDPREDMFRSRFEKFDW
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Known secondary structure (DSSP)
S

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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