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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jb9M_

Fold library idPDB HeaderMoleculeTitle
c3jb9M_PDB header: rna binding protein/rnaChain: M: PDB Molecule: pre-mrna-processing protein 45;PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution


Added to library: Sat Sep 26 08:30:03 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVDYNAIARQGHEHGELVQASFRDLIPLRARLGVGEISLEKPSDEQKQEVANKTKLALQKILSKQIAQSQ
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Known secondary structure (DSSP)
TTTTTTTSSSSS

SS


SGGGGS
TTT
SS





S


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PKSAVVQQRDDPVYIRYTPSNQMGQALSKQRIIKMVTAEQDPMEPPKFRHKKVPRGPPSPPPPVLHSPPR
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Known secondary structure (DSSP)

SS





S





SSSTT










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 .........150.........160.........170.........180.........190.........200.......
Sequence KVSAQEQQDWQIPPSISNWKNPKGYTIPLDKRDVEINDGFAKFSEALYTVERQAREEVRYRAIMRQK
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Known secondary structure (DSSP)


TTT






SS


S




GGG







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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