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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jb6B_

Fold library idPDB HeaderMoleculeTitle
c3jb6B_PDB header: transferase/viral proteinChain: B: PDB Molecule: viral structural protein 4;PDBTitle: in situ structures of the segmented genome and rna polymerase complex2 inside a dsrna virus


Added to library: Sat Oct 31 08:21:59 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FAIDPLKHSKLYEEYGLYLRPHAPTIRSIKYASLIHSMLAKHAARHNGTLINPRMYADMITLGNTKVTDI
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Known secondary structure (DSSP)

S
TTTSTT

B



TTTTTT

S
T






T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTYKALTEMSTLIESFRLPSGLALIIFDDEKYQSLIPNYINQLIAYTQPHIIPTWQGIADFSDTYLRSYF
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Known secondary structure (DSSP) TTT

SS



S
TSS
TTS


BSSSSB
TTSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence KRPFELTASNLAAPQKYNLSPMTRSIFNNTGREDAVIRKLYGYGEYVFIRYEGCLITWTGIYGEVTMMVN
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Known secondary structure (DSSP)

TTT


TTTS


TTT
SSS
TT
TTS







SSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSKRDLGLDVGDDYLKEYKKLLFYGVITDAIPSGISARSTIMKISPHKMMNPSGGALAVLSKFLEAVVST
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Known secondary structure (DSSP) S
TTTS


TT
BSSTT
S
SS



TT
B





TT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NVINATLVVYAEKGAGKTSFLSTYAEQLSLASGQVVGHLSSDAYGRWLAKNKDVEEPSFAYDYVLSLDTD
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Known secondary structure (DSSP) S
S


TTS

S

TTTS
SS



TST
 .........360.........370.........380.........390.........400.........410.........420
Sequence DNESYYEQKASELLISHGISEVAQYELLSVRKKIKMMDEMNEVLIAQLENADTHSERNFYYMVSTGKTTP
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Known secondary structure (DSSP) TS

TTT

SS
SS

SSST
SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence RTLIVEGHFNAQDATIARTDTTVLLRTINDTTQAMRDRQRGGVVQLFLRDTYYRLLPALHTTVYPFEMLE
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Known secondary structure (DSSP) SSSGGGGGTS


S


S


TTTT

S
S
 ........
Sequence SIRRWKWV
Predicted secondary structure



SS confidence







Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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