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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jadC_

Fold library idPDB HeaderMoleculeTitle
c3jadC_PDB header: signaling protein/antagonistChain: C: PDB Molecule: glycine receptor subunit alphaz1;PDBTitle: structure of alpha-1 glycine receptor by single particle electron2 cryo-microscopy, strychnine-bound state


Added to library: Sat Sep 12 08:21:16 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APSEFLDKLMGKVSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEY
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Known secondary structure (DSSP)
SSSS


SSS
TTTTSS
TTTT
STT

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMD
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Known secondary structure (DSSP) SSSS
B

TTGGGTS



SS

SSS



TTS





SSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLER
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Known secondary structure (DSSP) TTT

SSSS
S



SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA
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Known secondary structure (DSSP)

TTS
SS

TTS


SS

 .........290.........300.........310.........320.........330.......
Sequence VCLLFVFSALLEYAAVNFIARKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITYKLV
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Known secondary structure (DSSP)

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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