Fold library entry viewer: c3ja84_

Added to library: Sat Aug 8 08:34:01 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	R	I	I	W	G	T	N	V	S	I	Q	E	C	T	T	N	F	R	N	F	L	M	S	F	K	Y	K	F	R	K	I	L	D	E	R	D	E	E	L	Y	Y	I	K	Q	L	N	E	M	R	E	L	G	T	S	N	L	N	L	D	A	R	N	L	L	A	Y	K	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T				S	S	S											S		S							T	T					S														T				B				S	S	S	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	D	L	Y	H	Q	L	L	N	Y	P	Q	E	V	I	S	I	M	D	Q	T	I	K	D	C	M	V	S	L	I	V	D	N	N	L	D	Y	D	L	D	E	I	E	T	K	F	Y	K	V	R	P	Y	N	V	G	S	C	K	G	M	R	E	L	N	P	N	D	I	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																					T	T	S	S	S		S	S	S	S					S				B											S	T	T			T	T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	N	L	K	G	L	V	L	R	S	T	P	V	I	P	D	M	K	V	A	F	F	K	C	N	V	C	D	H	T	M	A	V	E	I	D	R	G	V	I	Q	E	P	A	R	C	E	R	I	D	C	N	E	P	N	S	M	S	L	I	H	N	R	C	S	F	A	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B				B															S	S	S							B			S	S						S	S		S	S	S		S										T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	V	I	K	L	Q	E	T	P	D	F	V	P	D	G	Q	T	P	H	S	I	S	L	C	V	Y	D	E	L	V	D	S	C	R	A	G	D	R	I	E	V	T	G	T	F	R	S	I	P	I	R	A	N	S	R	Q	R	V	L	K	S	L	Y	K	T	Y	V	D	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			S	S												G	G	G	T	T		S		T	T		B														S	S	S	S	S	S					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	V	K	V	S	D	K	R	L	D	V	D	T	S	T	I	E	Q	E	L	M	Q	N	K	V	D	H	N	E	V	E	E	V	R	Q	I	T	D	Q	D	L	A	K	I	R	E	V	A	A	R	E	D	L	Y	S	L	L	A	R	S	I	A	P	S	I	Y	E	L	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B						S	S	S									T					S	S	S	S	S			S			S															T	T		T	T											S	S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	K	K	G	I	L	L	Q	L	F	G	G	T	N	K	T	F	T	K	G	G	R	Y	R	G	D	I	N	I	L	L	C	G	D	P	S	T	S	K	S	Q	I	L	Q	Y	V	H	K	I	T	P	R	G	V	Y	T	S	G	K	G	S	S	A	V	G	L	T	A	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	S	S					S									S	S	S	S	S												S	S	S						S	S	S			T	T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	R	D	V	D	T	K	Q	L	V	L	E	S	G	A	L	V	L	S	D	G	G	V	C	C	I	D	E	F	D	K	M	S	D	S	T	R	S	V	L	H	E	V	M	E	Q	Q	T	I	S	I	A	K	A	G	I	I	T	T	L	N	A	R	S	S	I	L	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S												T		S	S					S	S	G	G	G			S	S	T	T	T	T								S							S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	P	I	G	S	R	Y	N	P	N	L	P	V	T	E	N	I	D	L	P	P	P	L	L	S	R	F	D	L	V	Y	L	V	L	D	K	V	D	E	K	N	D	R	E	L	A	K	H	L	T	N	L	Y	L	E	D	K	P	E	H	I	S	Q	D	D	V	L	P	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S			S	S	S						T		S								S	S											T	T	T									S			S	S		S	S				S	S		S	S				S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	L	T	M	Y	I	S	Y	A	K	E	H	I	H	P	I	I	T	E	A	A	K	T	E	L	V	R	A	Y	V	G	M	R	K	A	T	T	R	Q	L	E	S	M	I	R	L	A	E	A	H	A	K	M	K	L	K	N	V	V	E	L	E	D	V	Q	E	A	V	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																B		T	T	T	T																T																G	G	G		S	B			S	T	T
	.	.	.	.	.	.	.	.	.	640
Sequence	I	R	S	A	I	K	D	Y	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S

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PDB structure

FASTA sequence

Hidden Markov model

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