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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ja7L_

Fold library idPDB HeaderMoleculeTitle
c3ja7L_PDB header: viral proteinChain: L: PDB Molecule: portal protein gp20;PDBTitle: cryo-em structure of the bacteriophage t4 portal protein assembly at2 near-atomic resolution


Added to library: Sat Jul 25 08:21:35 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NWISELIDTYRNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVLNHLSF
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S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QRKGSDHFRRWYVDSRIFFHKIIDPKRPKEGIKELRRLDPRQVQYVYFIYDTAHESYACDGRMYEAGTKI
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 .........150.........160.........170.........180.........190.........200.........210
Sequence KIPKAAVVYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAA
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SS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence EHMQHVMNTMKNRVVYDASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGADNTGNMEDIRWFRQA
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S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LYMALRVPLSRIPQDQQGGVMFDSGTSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWN
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TTTTTTS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DEINNIKIEFHRDSYFAELKEAEILERRINMLTMAEPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEE
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TTT
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Sequence SKEARFQD
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Known secondary structure (DSSP) TSSSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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