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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j9qF_

Fold library idPDB HeaderMoleculeTitle
c3j9qF_PDB header: structural proteinChain: F: PDB Molecule: sheath;PDBTitle: atomic structures of a bactericidal contractile nanotube in its pre-2 and post-contraction states


Added to library: Sat Apr 4 08:15:29 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPNVPVLLTSKKDAAAAFGIGSSIYLACEA
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Known secondary structure (DSSP)



S




















SS



TTS
SSS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IYNRAQAVIVAVGVETAETPEAQASAVIGGISAAGERTGLQALLDGKSRFNAQPRLLVAPGHSAQQAVAT
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Known secondary structure (DSSP) TT



SS
BS
STTS
BGGGGGGGSS


S
SSTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AMDGLAEKLRAIAILDGPNSTDEAAVAYAKNFGSKRLFMVDPGVQVWDSATNAARNAPASAYAAGLFAWT
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Known secondary structure (DSSP) TTT



SS
STT


SS
B
S
B

TTTT



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DAEYGFWSSPSNKEIKGVTGTSRPVEFLDGDETCRANLLNNANIATIIRDDGYRLWGNRTLSSDSKWAFV
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Known secondary structure (DSSP) TT
TTS

TT
B

S


BSS




SSSTT
TTTT
BTTTT


B
S
SSGGG
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence TRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAFMRDLKNQGAVINFEVYADPDLNSASQLAQG
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Known secondary structure (DSSP) TT
GGGSSS


TTTTS

B

TTT

TT
 .........360.........370.........380.....
Sequence KVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA
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Known secondary structure (DSSP)



B















SSTTTTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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