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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j8bA_

Fold library idPDB HeaderMoleculeTitle
c3j8bA_PDB header: translationChain: A: PDB Molecule: eukaryotic translation initiation factor 3 subunit a;PDBTitle: model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map


Added to library: Sat Oct 25 09:21:06 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDLRKSHLAKEGLYQ
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Known secondary structure (DSSP)

SS
STT
T
GGGTTS
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQ
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Known secondary structure (DSSP) TTSS


TT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAF
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Known secondary structure (DSSP) TT
STT


TTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KAVEDIHGLFSLSKKPPKPQLMANYYNKVSTVFWKSGNALFHASTLHRLYHLSREMRKNLTQDEMQRMST
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Known secondary structure (DSSP)

S


T
SSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence RVLLATLSIPITPERTDIARLLDMDGIIVEKQRRLATLLGLQAPPTRIGLINDMVRFNVLQYVVPEVKDL
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Known secondary structure (DSSP) SS








SSS

TT
TT
SS


STS
 .........360.........370.........380.........390.........400.........410.........420
Sequence YNWLEVEFNPLKLCERVTKVLNWVREQPEKEPELQQYVPQLQNNTILRLLQQVSQIYQSIEFSRLTSLVP
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Known secondary structure (DSSP) TS


TTTT
SS
 .........430.........440.........450.........460.........470.........480........
Sequence FVDAFQLERAIVDAARHCDLQVRIDHTSRTLSFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
SSTTS


TTTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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