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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3j6vR_ | PDB header: ribosome | Chain: R: PDB Molecule: 28s ribosomal protein s18a, mitochondrial; | PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome |
Added to library: Sat Jun 21 08:21:20 2014 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | V | E | I | Q | E | G | K | T | T | I | I | E | G | R | I | T | G | T | P | K | E | S | P | N | P | P | N | P | S | G | Q | C | P | I | C | R | W | N | L | K | H | K | Y | S | Y | E | D | V | L | L | L | S | Q | F | I | R | P | H | G | G | M | L | P | R | S | I | T | G | L | C |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | T | T | B | S | S | T | T | S | S | S | S | S | T | T | S | S | T | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | T | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Q | E | E | H | R | K | I | E | E | C | V | K | M | A | H | R | A | G | L | L | P | N | H | R | P | K | L | P | E | G | F | F | P | K | T | R | P | R | L | N | R | Y | L | T | R | W | S | P | R | S | V | K | P | I | Y | N | K | G | H | R | W | N | K | V | R | M | A | V | G | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | T | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | S | S | S | S | B | S | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | ||||||
Sequence | P | L | L | K | D | N | V | S | Y | T | G | R | P | L | V | L | Y | H | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | B | S | S | S | S | S | S |
Download: | PDB structure | FASTA sequence |
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