PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3j6vG_

Fold library id	PDB Header	Molecule	Title
c3j6vG_	PDB header: ribosome	Chain: G: PDB Molecule: 28s ribosomal protein s7, mitochondrial;	PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome

Links to external resources
Added to library: Sat Jun 21 08:21:28 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P E Y Q D P Q I D K E Y Y R K P L A Q L T E E E T Y E R E L R K T Q V I K A A P A T K T S S V F E D P V I S K F T N M M M K G G N K I L A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S
S S
T T
T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S L M T Q T L E A V K R K Q F E K Y H A A S A E E Q A T V E R N P Y T I F H Q A L K N C E P V I G L V P I L K G G H F Y Q V P V P L A E R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S S S S S
S S
S
T
S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence R R F L A M K W M I T E C R E K K P R R M L M P E K L S Q E L L E A F C N R G P V I K R K H D M H K M A E A N R A L A H Y R W W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S S T T
T T G G G S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	E	Y	Q	D	P	Q	I	D	K	E	Y	Y	R	K	P	L	A	Q	L	T	E	E	E	T	Y	E	R	E	L	R	K	T	Q	V	I	K	A	A	P	A	T	K	T	S	S	V	F	E	D	P	V	I	S	K	F	T	N	M	M	M	K	G	G	N	K	I	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	S											S					S	S																T	T											T		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	M	T	Q	T	L	E	A	V	K	R	K	Q	F	E	K	Y	H	A	A	S	A	E	E	Q	A	T	V	E	R	N	P	Y	T	I	F	H	Q	A	L	K	N	C	E	P	V	I	G	L	V	P	I	L	K	G	G	H	F	Y	Q	V	P	V	P	L	A	E	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	S	S	S	S	S	S	S		S	S			S													T			S									T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	R	R	F	L	A	M	K	W	M	I	T	E	C	R	E	K	K	P	R	R	M	L	M	P	E	K	L	S	Q	E	L	L	E	A	F	C	N	R	G	P	V	I	K	R	K	H	D	M	H	K	M	A	E	A	N	R	A	L	A	H	Y	R	W	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S			S			S	S	S												T	T																		T	T	G	G	G	S	S