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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j6vE_

Fold library idPDB HeaderMoleculeTitle
c3j6vE_PDB header: ribosomeChain: E: PDB Molecule: 28s ribosomal protein s5, mitochondrial;PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome


Added to library: Sat Jun 21 10:12:29 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FFTKLTADELWKGALAETGAGARKGRGKRTKRKRRKDLNRGQIIGEGRRGFLWPGLNAPLMKSGAIQTIT
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Known secondary structure (DSSP)




S



SS
S
SS

T



SSTTSSS
SSTT






TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QRSKEEQEKVEADMVQQREEWDRKRKMKVKRERGWSGNSWGGISLGPPDPGPNGETYDDFDTRILEVRNV
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Known secondary structure (DSSP) S
SSSS
ST



SSSS
SSSTTTTS
SSSS






 .........150.........160.........170.........180.........190.........200.........210
Sequence FNMTAKEGRKRSVRVLVAVGNGRGAAGFAIGKATERADAFRKAKNRAVHYLHYIERYEDHTIYHDISLTF
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Known secondary structure (DSSP)

B
SSSSB




SSSSS

S

S

SSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence KRTHIKMKKQPRGYGLRCHRAITTICRLIGIKDMYAKVSGSVNMLSLTRGLFQGLSRQETHQQLADKKSL
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Known secondary structure (DSSP) TT





TTS


S
T








S


S


S

 .........290.........300.........310.........320.........330.........340..
Sequence HVVEFREECGPLPIVVASPQGALRKDPEPEDEVPDIKLDWDDVKAVQGMKRSVWSGLKRAAT
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Known secondary structure (DSSP)
SSS
TTTT


SSSSSSSSS


SSSSSSSSSS




TTSS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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