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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j66s_

Fold library idPDB HeaderMoleculeTitle
c3j66s_PDB header: ribosomeChain: S: PDB Molecule:PDBTitle: arx1 pre-60s particle. this entry contains the alternative position2 for rlp7.


Added to library: Sat Mar 29 08:19:18 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSSTQDSKAQTLNSNPEILLRKRRNADRTRIERQELAKKKREEQIKKKRSNKNKFVRAESIVAKTLATSR
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Known secondary structure (DSSP)

S




S
SS

TTTSSTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EKERIKRVSILEDKKAKNETQHIASGKDFILKITEKANGAEENSVDLEETEEEEDDGLIREKTTYDGKPA
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Known secondary structure (DSSP) TTT
SS
SS

S










SSSSS




B
B







S







S


S



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQK
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Known secondary structure (DSSP)

BB
S
TTSS


T

SSSBB

S
TT
SS
B




 .........220.........230.........240.........250.........260.........270.........280
Sequence RGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPFKLNREVSGF
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Known secondary structure (DSSP)



TTS
SSSSSS


S




SSS

STT
TTTS
SS






GGGS
 .........290.........300.........310.........320..
Sequence GSLNRLRKIKQREAESRTRQFSNAATAPVIEVDIDSLLAKLN
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Known secondary structure (DSSP) S
SS




SS





S

GGGSSS
S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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