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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j4uA_

Fold library idPDB HeaderMoleculeTitle
c3j4uA_PDB header: virusChain: A: PDB Molecule: major capsid protein;PDBTitle: a new topology of the hk97-like fold revealed in bordetella2 bacteriophage: non-covalent chainmail secured by jellyrolls


Added to library: Sat Jan 11 08:52:28 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQ
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Known secondary structure (DSSP)




SB
S
SSTT
SSSS

S




S








SSS











SS



 .........80.........90.........100.........110.........120.........130.........140
Sequence PEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMG
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Known secondary structure (DSSP)








B



B
GGG
B

SSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence LTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQ
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Known secondary structure (DSSP) SBTTT

TTSTTGGGB


S

SS
BTTTB
SSS
SS
B

B

SB



SSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence GYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRS
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Known secondary structure (DSSP) BB
BB
B

S
GGG
TTT

TTS
SS

SS


SS
 .........290.........300.........310.........320.......
Sequence FLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV
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Known secondary structure (DSSP) TT


STTSS




BSSSSB
SSS
SSB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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