Fold library entry viewer: c3j3iA_

Added to library: Sat May 17 08:17:52 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	A	P	V	L	Y	G	G	A	G	G	T	A	T	G	P	G	D	M	R	R	S	L	M	H	E	K	K	Q	V	F	A	E	L	R	R	E	A	Q	A	L	R	V	A	K	E	A	R	G	K	M	S	V	W	D	P	S	T	R	E	G	A	R	G	Y	R	E	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T				S	S	S	S			S								S	S				S			T	T														S		S					S	S							S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	R	F	G	R	Q	I	A	S	L	L	Q	Y	F	E	N	M	H	S	P	A	L	D	I	I	A	C	D	K	F	L	L	K	Y	Q	I	Y	G	D	I	D	R	D	P	A	F	G	E	N	T	M	T	A	E	V	P	V	V	W	D	K	C	E	V	E	V	K	L	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S												T	T	T			T	T	T	G	G	G	S	S												S	S					S	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	P	L	Q	K	L	M	S	R	A	K	L	V	G	A	A	R	E	G	I	P	N	R	N	D	V	A	K	S	T	G	W	N	Q	D	Q	V	Q	K	F	P	D	N	R	M	D	S	L	I	S	L	L	E	Q	M	Q	T	G	Q	S	K	L	T	R	L	V	K	G	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S							T									S							S			T	T	S									T	T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	L	L	E	M	A	E	R	K	E	V	D	F	H	V	G	N	H	I	H	V	T	Y	A	I	A	P	V	C	D	S	Y	D	L	P	G	R	C	Y	V	F	N	S	K	P	T	S	E	A	H	A	A	V	L	L	A	M	C	R	E	Y	P	P	P	Q	F	A	S	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	S					B										S	S	S							S		S	S	S							S			S	S												S	S	S		T	T	S			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	V	P	A	D	A	E	D	V	C	I	V	S	Q	G	R	Q	I	Q	P	G	S	A	V	T	L	N	P	G	L	V	Y	S	S	I	L	T	Y	A	M	D	T	S	C	T	D	L	L	Q	E	A	Q	I	I	A	C	S	L	Q	E	N	R	Y	F	S	R	I	G	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S						S	S				S	S	S			B				T	T	T										T	T	S		S	T	T													S		S	S			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	V	V	S	L	Y	D	L	M	V	P	A	F	I	A	Q	N	S	A	L	E	G	A	R	L	S	G	D	L	S	K	A	V	G	R	V	H	Q	M	L	G	M	V	A	A	K	D	I	I	S	A	T	H	M	Q	S	R	T	G	F	D	P	S	H	G	I	R	Q	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S																	T	T																								T	T	T		S	S			S								S	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	S	N	S	R	L	V	T	Q	M	A	S	K	L	T	G	I	G	L	F	D	A	T	P	Q	M	R	I	F	S	E	M	D	T	A	D	Y	A	D	M	L	H	L	T	I	F	E	G	L	W	L	V	Q	D	A	S	V	C	T	D	N	G	P	I	S	F	L	V	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T			S	S	S				S						S				T	T	S	S								S	S				T					T	T	S	S	T	T											S					S	S			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	K	L	L	S	A	D	R	A	G	Y	D	V	L	V	E	E	L	T	L	A	N	I	R	I	E	H	H	K	M	P	T	G	A	F	T	T	R	W	V	A	A	K	R	D	S	A	L	R	L	T	P	R	S	R	T	A	H	R	V	D	M	V	R	E	C	D	F	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-				S	S									S	S	S	S										S								B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	M	N	L	K	A	A	G	P	K	A	R	L	R	G	S	G	V	K	S	R	R	R	V	S	E	V	P	L	A	H	V	F	R	S	P	P	R	R	E	S	T	T	T	T	D	D	S	P	R	W	L	T	R	E	G	P	Q	L	T	R	R	V	P	I	I	D	E	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S										T	T	T				S	S		T	T	S		S						T	T	S	S						S	T	T	T	T														T	T		S				B		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	Y	E	S	G	R	S	S	S	P	V	T	S	S	I	S	E	G	T	S	Q	H	E	E	E	M	G	L	F	D	A	E	E	L	P	M	Q	Q	T	V	I	A	T	E	A	R	R	R	L	G	R	G	T	L	E	R	I	Q	E	A	A	L	E	G	Q	V	A	Q	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S	S					G	G	G	S	S					S	S	S	S			T	T	T							T	T	S		S			B	S		S	S	S	S				B										S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	T	A	E	K	N	R	R	I	E	A	M	L	S	A	R	D	P	Q	F	T	G	R	E	Q	I	T	K	M	L	S	D	G	G	L	G	V	R	E	R	E	E	W	L	E	L	V	D	K	T	V	G	V	K	G	L	K	E	V	R	S	I	D	G	I	R	R	H	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T											S	S				S						T	T	T	S	T	T								T	T	T			S					S								S	S						S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	Y	G	E	R	E	G	F	A	V	V	R	T	L	L	S	G	N	S	K	H	V	R	R	I	N	Q	L	I	R	E	S	N	P	S	A	F	E	T	E	A	S	R	M	R	R	L	R	A	D	W	D	G	D	A	G	S	A	P	V	N	A	L	H	F	V	G	N	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				T	T	T	S	S		T																T	T						S	S	S	S			T	T	T								S	S			G	G	G	S						T	T	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	G	W	K	R	W	L	E	N	N	N	I	P	S	D	I	Q	V	A	G	K	K	R	M	C	S	Y	L	A	E	V	L	S	H	G	N	L	K	L	S	D	A	T	K	L	G	R	L	V	E	G	T	S	L	D	L	F	P	P	Q	L	S	S	E	E	F	S	T	C	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S				G	G	G														T	T							S	S				T	T	T	T	S	S							S		S			S	S	S	T											T		T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	A	T	L	A	W	R	N	A	P	S	S	L	G	V	R	P	F	A	Q	E	D	S	R	W	L	V	M	A	A	T	C	G	G	G	S	F	G	I	G	K	L	K	S	L	C	K	E	F	S	V	P	K	E	L	R	D	A	L	R	V	K	Y	G	L	F	G	G	K	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S				S	S	S			S	S						T	T	T								T	T	S		S									B	S	S			S	S						G	G	G	G	T	S	S	T	T	S	S	S	S		S	S
	.	.
Sequence	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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